NonredundantMotifs:73: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;50;177;179;70!2;60;170;172;75!3;91;151;199;37!4;72;49;298;60!5;10;297;144;30!6;6;362;2;111!7;30;125;182;144!8;191;154;121;15!9;9;2;469;1!10;0;3;477;1!11;1;480;0;0!12;0;480;0;1!13;0;2;0;479!14;84;122;219;56 | |||
|entrez_gene_id=7543 | |entrez_gene_id=7543 | ||
|motif_cluster_2013_march_motif_members= | |motif_cluster_2013_march_motif_members= /HOCOMOCO:ZFX_f1 /HOMER:ZNF711_SH-SY5Y-ZNF711-ChIP-Seq~ZFX_mES-Zfx-ChIP-Seq /JASPAR:MA0146.1;Zfx | ||
|name= | |name=non-redundant73 | ||
|representative_motif_db= | |representative_motif_db=JASPAR | ||
|representative_motif_id= | |representative_motif_id=MA0146.1 | ||
|representative_motif_name= | |representative_motif_name=Zfx | ||
|score= | |score=1.3772349181853873 | ||
|uniprot_entry_name=ZFX_HUMAN | |uniprot_entry_name=ZFX_HUMAN | ||
}} | }} | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant73
- db :JASPAR
- Id :MA0146.1
- name :Zfx
- score :1.3772349181853873
- External refs:
- Internal refs:
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Sub Motif Members
