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FFCP PHASE1:Hg19::chr1:28160911..28160914,+: Difference between revisions

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{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=677774
|EntrezGene=677774
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=32555
|HGNC=32555
|TSSclassifier=N
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENST00000517138,NR_002997,uc001boy.1_5end
|association_with_transcript=0bp_to_ENST00000517138,NR_002997,uc001boy.1_5end
|cluster_id=chr1:28160911..28160914,+
|coexpression_cluster_id=C229
|coexpression_cluster_id=C229
|description=CAGE_peak_1_at_SCARNA1_5end
|description=CAGE_peak_1_at_SCARNA1_5end

Latest revision as of 09:06, 17 September 2015

Short description:p1@SCARNA1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_SCARNA1_5end
Coexpression cluster:C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart
Association with transcript: 0bp_to_ENST00000517138, NR_002997, uc001boy.1_5end
EntrezGene:SCARNA1
HGNC: 32555
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data