FFCP PHASE1:Hg19::chr10:114710083..114710092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=6934 | |EntrezGene=6934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11641 | |HGNC=11641 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=F8W7T5,E2GH25,Q9NQB0,C6ZRK5,B4DRJ8,C6ZRJ7,C6ZRK1,C6ZRJ8,C6ZRJ9,C6ZRK0,F8W742,C6ZRK2,B9X074,Q6FHW4 | |UniProt=F8W7T5,E2GH25,Q9NQB0,C6ZRK5,B4DRJ8,C6ZRJ7,C6ZRK1,C6ZRJ8,C6ZRJ9,C6ZRK0,F8W742,C6ZRK2,B9X074,Q6FHW4 | ||
|association_with_transcript=74bp_to_ENST00000355717,ENST00000355995,ENST00000534894,ENST00000536810,ENST00000538897,ENST00000543371,ENST00000545257,NM_001146274,NM_001146283,NM_001146284,NM_001146285,NM_001146286,NM_001198525,NM_001198526,NM_001198527,NM_001198528,NM_001198529,NM_001198530,NM_001198531,NM_030756,uc001lac.3,uc001lad.3,uc001lae.3,uc001laf.3,uc001lag.3,uc001lah.2,uc010qrk.1,uc010qrl.1,uc010qrm.1,uc010qrn.1,uc010qro.1,uc010qrp.1,uc010qrq.1_5end | |association_with_transcript=74bp_to_ENST00000355717,ENST00000355995,ENST00000534894,ENST00000536810,ENST00000538897,ENST00000543371,ENST00000545257,NM_001146274,NM_001146283,NM_001146284,NM_001146285,NM_001146286,NM_001198525,NM_001198526,NM_001198527,NM_001198528,NM_001198529,NM_001198530,NM_001198531,NM_030756,uc001lac.3,uc001lad.3,uc001lae.3,uc001laf.3,uc001lag.3,uc001lah.2,uc010qrk.1,uc010qrl.1,uc010qrm.1,uc010qrn.1,uc010qro.1,uc010qrp.1,uc010qrq.1_5end | ||
|cluster_id=chr10:114710083..114710092,+ | |||
|description=CAGE_peak_8_at_TCF7L2_5end | |description=CAGE_peak_8_at_TCF7L2_5end | ||
|id=chr10:114710083..114710092,+ | |id=chr10:114710083..114710092,+ | ||
Latest revision as of 11:04, 16 September 2015
| Short description: | p8@TCF7L2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_TCF7L2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 74bp_to_ENST00000355717, ENST00000355995, ENST00000534894, ENST00000536810, ENST00000538897, ENST00000543371, ENST00000545257, NM_001146274, NM_001146283, NM_001146284, NM_001146285, NM_001146286, NM_001198525, NM_001198526, NM_001198527, NM_001198528, NM_001198529, NM_001198530, NM_001198531, NM_030756, uc001lac.3, uc001lad.3, uc001lae.3, uc001laf.3, uc001lag.3, uc001lah.2, uc010qrk.1, uc010qrl.1, uc010qrm.1, uc010qrn.1, uc010qro.1, uc010qrp.1, uc010qrq.1_5end |
| EntrezGene: | TCF7L2 |
| HGNC: | 11641 |
| UniProt: | F8W7T5E2GH25Q9NQB0C6ZRK5B4DRJ8C6ZRJ7C6ZRK1C6ZRJ8C6ZRJ9C6ZRK0F8W742C6ZRK2B9X074Q6FHW4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intermediate monocyte | 8.99e-14 | 9 |
| CD14-positive, CD16-positive monocyte | 8.99e-14 | 9 |
| germ line cell | 3.39e-07 | 7 |
| germ cell | 3.39e-07 | 7 |
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 1.58e-11 | 25 |
| intestine | 2.41e-07 | 17 |
