FFCP PHASE1:Hg19::chr6:163148161..163148181,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:163148161..163148181,+
|short_description=p4@PACRG
|description=CAGE_peak_4_at_PACRG_5end
|association_with_transcript=0bp_to_ENST00000337019,ENST000003668...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=135138 | |EntrezGene=135138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19152 | |HGNC=19152 | ||
|TSSclassifier=strong | |||
|UniProt=Q96M98 | |UniProt=Q96M98 | ||
|association_with_transcript=0bp_to_ENST00000337019,ENST00000366889,NM_001080378,NM_152410,uc003qua.2,uc003qub.2_5end | |||
|cluster_id=chr6:163148161..163148181,+ | |||
|description=CAGE_peak_4_at_PACRG_5end | |||
|id=chr6:163148161..163148181,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.22e-32!115;UBERON:0001049!1.68e-19!57;UBERON:0005068!1.68e-19!57;UBERON:0006241!1.68e-19!57;UBERON:0007135!1.68e-19!57;UBERON:0002616!1.38e-17!59;UBERON:0003075!1.20e-15!86;UBERON:0007284!1.20e-15!86;UBERON:0005743!2.39e-15!86;UBERON:0002346!1.09e-14!90;UBERON:0001017!1.82e-14!82;UBERON:0000073!3.33e-14!94;UBERON:0001016!3.33e-14!94;UBERON:0002780!3.09e-13!41;UBERON:0001890!3.09e-13!41;UBERON:0006240!3.09e-13!41;UBERON:0000955!6.02e-13!69;UBERON:0006238!6.02e-13!69;UBERON:0001893!7.64e-13!34;UBERON:0002020!1.05e-12!34;UBERON:0003528!1.05e-12!34;UBERON:0003080!1.21e-12!42;UBERON:0002791!2.71e-12!33;UBERON:0001869!4.42e-12!32;UBERON:0000153!2.78e-10!129;UBERON:0007811!2.78e-10!129;UBERON:0003056!2.79e-10!61;UBERON:0002619!3.15e-10!22;UBERON:0001950!6.26e-09!20;UBERON:0000033!9.93e-09!123;UBERON:0003076!1.91e-08!15;UBERON:0003057!1.91e-08!15;UBERON:0000956!3.17e-08!25;UBERON:0000203!3.17e-08!25;UBERON:0004121!2.99e-07!169;UBERON:0004733!5.48e-07!12;UBERON:0002028!5.48e-07!12;UBERON:0007277!5.48e-07!12;UBERON:0000924!5.99e-07!173;UBERON:0006601!5.99e-07!173;UBERON:0000481!6.71e-07!347;UBERON:0002420!8.57e-07!9;UBERON:0007245!8.57e-07!9;UBERON:0010009!8.57e-07!9;UBERON:0010011!8.57e-07!9;UBERON:0000454!8.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.76e-08;11!UBERON:0000341;1.82e-08;2!UBERON:0000922;3.36e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.78e-12,114;UBERON:0003135,1.17e-08,11;UBERON:0000341,1.80e-08,2 | |||
|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0.408001382488506,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.587200878669695,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,0.393010762749165,0.616804496998528,0,1.30368906653436,1.89379122293893,0,0,0,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0,0.289803085735052,1.33457906845854,1.33770414044857,0,0,1.53288197440768,1.03088233644789,0.253019692019503,0,0,0,0.602300476311091,0.383959833463255,0,0.710331756132051,0,1.00803371612366,0.267440195783507,1.15859523106239,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.443458794925128,0.351339142772504,3.1434978119451,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.276149695926898,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,7.60530208930985,0.982827216677626,0,0,0.368965315629341,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0.985326475791887,0.264145302039678,0.414656231081544,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0.788123040807709,0,0.128343036279748,0.254094624222463,0,1.54657762555539,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0,0.783204629850962,0,0.206768026122887,0.431428401637234,0.853820462427555,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,1.854738209659,0,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0,0,0,0.290033387828457,0,0.356128142586949,0.165284915360978,0.192190067365106,1.02090169995667,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,1.88287601553558,0.43050537267123,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,0.703347082052564,0,0,0.211125408127993,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.986434056369336,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.32656082487949,1.52581736317083,0.442317039724898,0.886642856860642,0.438770794307945,0,0.139423744278603,1.53900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0.296521128680622,0,0.104421949505455,0.404406797884062,0.802577647298789,0.937057782901357,0,0,0.728341138602278,7.10251925128903,1.20990716048664,0.30607276163049,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.678923115418936,0.176512253383001,0.225980740780532,0,0,0.759729551470544,0,0,1.28071796843612,0,0.288180834308212,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,1.11712960508902,1.3749625440701,0,0.798716001995964,1.28767814440971,1.11585728720936,1.14211903227435,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0.160753148465019,0,0,0,0.77380195455795,0.303747783290123,0.335434687599266,3.62506253576312,2.36045646607491,0,0.179287339332845,0,1.42939065274673,1.32418394073086,0.76280561296425,0.542999601753713,0,0.326587360109409,0,0,0,0,1.02586563574658,0,0.258565912723101,0.66116300871345,0,0,0.320362237703084,1.72924735609633,0.828478110694391,0,0,0,0,0,0,0,0.983617892129413,0,0,0.244052529803926,0.3755727921195,0.573409195690071,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0.302461847526478,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.829550616910385,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0.3062454773532,0.770750701157514,0,0.319267718114302,0.205116364240755,0.252071696221718,0.414943514785307,0.807378228159255,0,0,0.235939446695481,0,0,0,0,0.397832444232549,1.20336525358812,0,3.12605604493237,0,0,0,0.607838261565552,0.781078098613847,1.03343398250592,0.126831620387814,1.09394961803644,0,1.48863353516788,0,0,0,0,0,0.455324382702595,0,0,0,0.339848664884159,0.460409414939944,0,0.222462803784138,1.56986185701028,0.785577949580009,0,1.82631744101899,0,0,0.500335809236594,0,0,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0.118332000730565,0.255640214277473,0.846774100381858,0.22910686854405,0,0,0.223710863595585,0.098150233615243,0,0,0.513314034281235,2.3196288626764,2.91426595835484,0,6.96327713064789,0,0,0,0,0.154348316215889,0.437119121007915,0,0.735444965261716,0,0.392616934229891,0.594092800654172,0.4226557275834,0,0.469919589899268,0.193373663920732,0,0,0,0,2.19100916473955,0,0.286679166302903,0.946629373159108,0.407948941145488,0.436350690340377,1.5870805215462,0,0,0,0,0.218531143927391,0,0,0,0.0918948995348449,0,2.72803313585662,3.7514978221865,0.829169439458779,0.724030971033267,2.13233981900981,1.42838658878244,0.193766729508018,0.372448285775147,0,0.381882949668989,0.606351566874658,0.217716747896961,1.02669990325584,0.404112318087525,0.502055437748735,2.32862249582209,0,0,0,0.0898252021065869,0,2.68931177202306,2.44137706989443,0.665756774185513,0,0 | |phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0.408001382488506,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.587200878669695,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,0.393010762749165,0.616804496998528,0,1.30368906653436,1.89379122293893,0,0,0,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0,0.289803085735052,1.33457906845854,1.33770414044857,0,0,1.53288197440768,1.03088233644789,0.253019692019503,0,0,0,0.602300476311091,0.383959833463255,0,0.710331756132051,0,1.00803371612366,0.267440195783507,1.15859523106239,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.443458794925128,0.351339142772504,3.1434978119451,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.276149695926898,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,7.60530208930985,0.982827216677626,0,0,0.368965315629341,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0.985326475791887,0.264145302039678,0.414656231081544,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0.788123040807709,0,0.128343036279748,0.254094624222463,0,1.54657762555539,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0,0.783204629850962,0,0.206768026122887,0.431428401637234,0.853820462427555,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,1.854738209659,0,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0,0,0,0.290033387828457,0,0.356128142586949,0.165284915360978,0.192190067365106,1.02090169995667,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,1.88287601553558,0.43050537267123,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,0.703347082052564,0,0,0.211125408127993,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.986434056369336,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.32656082487949,1.52581736317083,0.442317039724898,0.886642856860642,0.438770794307945,0,0.139423744278603,1.53900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0.296521128680622,0,0.104421949505455,0.404406797884062,0.802577647298789,0.937057782901357,0,0,0.728341138602278,7.10251925128903,1.20990716048664,0.30607276163049,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.678923115418936,0.176512253383001,0.225980740780532,0,0,0.759729551470544,0,0,1.28071796843612,0,0.288180834308212,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,1.11712960508902,1.3749625440701,0,0.798716001995964,1.28767814440971,1.11585728720936,1.14211903227435,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0.160753148465019,0,0,0,0.77380195455795,0.303747783290123,0.335434687599266,3.62506253576312,2.36045646607491,0,0.179287339332845,0,1.42939065274673,1.32418394073086,0.76280561296425,0.542999601753713,0,0.326587360109409,0,0,0,0,1.02586563574658,0,0.258565912723101,0.66116300871345,0,0,0.320362237703084,1.72924735609633,0.828478110694391,0,0,0,0,0,0,0,0.983617892129413,0,0,0.244052529803926,0.3755727921195,0.573409195690071,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0.302461847526478,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.829550616910385,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0.3062454773532,0.770750701157514,0,0.319267718114302,0.205116364240755,0.252071696221718,0.414943514785307,0.807378228159255,0,0,0.235939446695481,0,0,0,0,0.397832444232549,1.20336525358812,0,3.12605604493237,0,0,0,0.607838261565552,0.781078098613847,1.03343398250592,0.126831620387814,1.09394961803644,0,1.48863353516788,0,0,0,0,0,0.455324382702595,0,0,0,0.339848664884159,0.460409414939944,0,0.222462803784138,1.56986185701028,0.785577949580009,0,1.82631744101899,0,0,0.500335809236594,0,0,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0.118332000730565,0.255640214277473,0.846774100381858,0.22910686854405,0,0,0.223710863595585,0.098150233615243,0,0,0.513314034281235,2.3196288626764,2.91426595835484,0,6.96327713064789,0,0,0,0,0.154348316215889,0.437119121007915,0,0.735444965261716,0,0.392616934229891,0.594092800654172,0.4226557275834,0,0.469919589899268,0.193373663920732,0,0,0,0,2.19100916473955,0,0.286679166302903,0.946629373159108,0.407948941145488,0.436350690340377,1.5870805215462,0,0,0,0,0.218531143927391,0,0,0,0.0918948995348449,0,2.72803313585662,3.7514978221865,0.829169439458779,0.724030971033267,2.13233981900981,1.42838658878244,0.193766729508018,0.372448285775147,0,0.381882949668989,0.606351566874658,0.217716747896961,1.02669990325584,0.404112318087525,0.502055437748735,2.32862249582209,0,0,0,0.0898252021065869,0,2.68931177202306,2.44137706989443,0.665756774185513,0,0 | ||
|short_description=p4@PACRG | |||
}} | }} |
Latest revision as of 17:49, 16 September 2015
Short description: | p4@PACRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PACRG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337019, ENST00000366889, NM_001080378, NM_152410, uc003qua.2, uc003qub.2_5end |
EntrezGene: | PACRG |
HGNC: | 19152 |
UniProt: | Q96M98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.78e-12 | 114 |
male reproductive organ | 1.17e-08 | 11 |
throat | 1.80e-08 | 2 |