FFCP PHASE1:Hg19::chr12:2027832..2027849,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=93589 | |EntrezGene=93589 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=20202 | |HGNC=20202 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q7Z3S7 | |UniProt=Q7Z3S7 | ||
|association_with_transcript=0bp_to_ENST00000280663_5end | |association_with_transcript=0bp_to_ENST00000280663_5end | ||
|cluster_id=chr12:2027832..2027849,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_5_at_CACNA2D4_5end | |description=CAGE_peak_5_at_CACNA2D4_5end |
Latest revision as of 18:31, 17 September 2015
Short description: | p5@CACNA2D4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CACNA2D4_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000280663_5end |
EntrezGene: | CACNA2D4 |
HGNC: | 20202 |
UniProt: | Q7Z3S7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@CACNA2D4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.74e-36 | 3 |
dendritic cell | 3.04e-10 | 10 |
erythroid lineage cell | 4.98e-07 | 2 |
erythroblast | 4.98e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 4.98e-07 | 2 |
erythroid progenitor cell | 4.98e-07 | 2 |
reticulocyte | 4.98e-07 | 2 |
proerythroblast | 4.98e-07 | 2 |
basophilic erythroblast | 4.98e-07 | 2 |
polychromatophilic erythroblast | 4.98e-07 | 2 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
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pineal body | 3.44e-25 | 2 |
regional part of epithalamus | 3.44e-25 | 2 |
secretory circumventricular organ | 3.44e-25 | 2 |
circumventricular organ | 3.44e-25 | 2 |
epithalamus | 3.44e-25 | 2 |
gland of diencephalon | 4.24e-13 | 4 |
neuroendocrine gland | 4.24e-13 | 4 |
regional part of diencephalon | 4.24e-13 | 4 |
retina | 8.57e-09 | 6 |
photoreceptor array | 8.57e-09 | 6 |
Showing 1 to 10 of 13 entries