FFCP PHASE1:Hg19::chr6:29600252..29600275,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:29600252..29600275,-
|short_description=p7@GABBR1
|description=CAGE_peak_7_at_GABBR1_5end
|association_with_transcript=10bp_to_ENST00000485508_5end
|Entre...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2550 | |EntrezGene=2550 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4070 | |HGNC=4070 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAS6 | |UniProt=F8WAS6 | ||
|association_with_transcript=10bp_to_ENST00000485508_5end | |||
|cluster_id=chr6:29600252..29600275,- | |||
|description=CAGE_peak_7_at_GABBR1_5end | |||
|id=chr6:29600252..29600275,- | |||
|ontology_enrichment_celltype=CL:0000047!5.93e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.56e-15;5!CL:0000540;4.17e-09;6!CL:0000404;4.17e-09;6!CL:0000047;7.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.77e-15,5;CL:0000047,7.85e-14,8;CL:0000540,4.57e-09,6;CL:0000031,4.57e-09,6;CL:0000404,4.57e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.35e-11;3!CL:0000031;4.17e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.94e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-12!82;UBERON:0005743!2.71e-12!86;UBERON:0003075!4.40e-11!86;UBERON:0007284!4.40e-11!86;UBERON:0001049!8.14e-11!57;UBERON:0005068!8.14e-11!57;UBERON:0006241!8.14e-11!57;UBERON:0007135!8.14e-11!57;UBERON:0003056!8.57e-11!61;UBERON:0000073!9.39e-11!94;UBERON:0001016!9.39e-11!94;UBERON:0002346!1.29e-10!90;UBERON:0004121!1.61e-10!169;UBERON:0002616!2.47e-10!59;UBERON:0000924!2.71e-10!173;UBERON:0006601!2.71e-10!173;UBERON:0002780!7.28e-10!41;UBERON:0001890!7.28e-10!41;UBERON:0006240!7.28e-10!41;UBERON:0000033!1.04e-09!123;UBERON:0001869!1.80e-09!32;UBERON:0003080!2.36e-09!42;UBERON:0002020!4.76e-09!34;UBERON:0003528!4.76e-09!34;UBERON:0000153!5.11e-09!129;UBERON:0007811!5.11e-09!129;UBERON:0001893!6.26e-09!34;UBERON:0002791!9.49e-09!33;UBERON:0000955!2.73e-08!69;UBERON:0006238!2.73e-08!69;UBERON:0000956!5.93e-08!25;UBERON:0000203!5.93e-08!25;UBERON:0002619!3.32e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.18e-07;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.273748850145768,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0,0.447830948479849,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0.633765858935825,0.637812899895131,0.628975936525128,0.673971786878971,0.600707571366025,0.16072558669708,2.85012743741249,1.79025009479181,0.547992461293902,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0.501559486172034,0.651844533267181,0.473447805734733,0,1.33692548262208,0,0,0,3.5865569523189,1.69077151827842,0,0,0,0.296573126324121,0.535081656179426,0,1.35971211237079,0.383220493601921,0,0,0.318565414324097,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0,0.267440195783507,0,2.43806866313962,0,0,1.0843174571537,0,0.144846518960824,0.795285947051099,0,1.13441780596881,0.665188192387692,0.351339142772504,0.392937226493138,0.728590576585084,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0,0.933633106199299,0.269421344139376,0.653847612453835,0.454072282934794,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0.704606991862589,0.161872944368132,0.280901613404497,0.61246251376468,0.491337269247072,0.516628905878827,0,0,0,0,0.673344455816265,0.750711119231785,0.554128230968366,0,0,0.150238058906597,0,1.4351170855109,0,0.211931901159562,1.20036438433761,0.103052529238439,1.54584324027377,0.18611685633159,0.168776332241266,0,0.504867548488229,0.0920498986422993,0.323292113637624,1.77504796258307,0.604512589365842,0.339121184620975,0.386521706326594,0.545492241181669,0.573609190778008,1.95157929807353,2.91565490307268,1.62671520017326,1.7622379352613,1.26160425437814,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0.492434012174795,0,0,0,0.335964256397719,1.13420077793909,0.626909658919938,0.581267877027924,0,3.94130590316755,0.088048434013226,0.207328115540772,0.144119953416961,0.37872730027914,0.253991577168676,0.381988425558278,1.17217447210047,0,0.719792448923265,0,0.285826432630578,0.672786506072164,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,1.0656887160644,0,1.08524321078289,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,1.27047312111232,1.30139853857622,3.09315525111078,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0.320182673410333,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0.447749509444357,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.137836572484531,1.6113036730241,1.30515024522806,0.426133137080504,0.356128142586949,0,0.192190067365106,0.893288987462089,0.10115778085555,0,0.62962469366128,0.6970372701606,0,0,0,0.18532421910392,0,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0.0982490410131212,0,0.709522128141196,0,0,0.75894634753143,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,1.23408681925858,0,0.540031437238115,1.58625035258854,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,1.03051603426729,0,0,0,0,0,0,1.35227839237992,1.99843180798692,9.86909035614947,0,0.146508179271894,0,0.334330152832435,0,0.23874448473769,0,0,0,0.703347082052564,0.333926115068718,0,0.422250816255987,0,0,1.25966373927138,0.409074730008619,0.123084805461069,0.933118762985422,0,0,0,0,0,0,0,0.185536196323703,5.98841394003583,0,0.349839999984783,0,0.1137934482855,0,0,0,0.291604613383254,0.694499979733169,0,0.723578631752448,3.05163472634166,3.20679853800551,2.06883333267483,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,4.32150372940407,2.48155226678899,2.54881294613061,0.839107934879214,0.37950746544837,3.33766815858795,0,0,0.141353071433941,0.432777279484182,0,0.176915129006678,0,0.593042257361244,0.123563938946503,0.104421949505455,0.134802265961354,0,0.702793337176017,0,0,0,0.394584402849391,1.20990716048664,3.67287313956588,0.063186579628488,0.60129367765797,0.207376382794494,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.225980740780532,0.548167698587004,0.19871461170299,0.886351143382302,0,0,0,0,0,0,0,0,1.49103042678519,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0.687481272035051,0.717873024576814,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,2.57205037544031,3.57602535152808,2.07720169014593,0,0,0.971992906528395,0,0,0.577000469484979,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0.903017728242729,0,0.226624183040251,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.3755727921195,0,0.443716206147409,0.496771223531068,0,0,0,0,0.941063278792687,0,0.144921028610825,0.298509605773748,0.467426619694449,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.450772826991655,0,0,0.181848659202559,0.429642228169954,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.323474434190045,0.157265941855896,0.327628914576042,0,0.212574920101683,0.123935764259002,0,0,0.157723490002507,0.80057074828547,0.352675943690684,0,0.578063025868136,0,0.638535436228605,0.41023272848151,4.53729053199093,0.138314504928436,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0,0.270150338473579,0,0,0.951237152908602,4.92277328116398,0,0,0,0,0.535701835878287,0,0,0.682986574053893,0,0,0.342976018874837,0.203909198930495,0.394636641377094,0,0.111231401892069,0.078493092850514,0.314231179832004,0.280272163313789,1.82631744101899,1.29556554731173,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.971421986118279,0,2.18845852677505,0.118920090777569,0,0.439762066981716,0,0,0,0,0.245148321753905,0.471353094203252,0,0.594092800654172,1.2679671827502,0.169927114687817,0.281951753939561,1.80482086326016,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0.475940431336403,3.9271562130634,0.5290268405154,0,0,0,2.3971620718665,0.327796715891087,0.886889507080059,0.713921808193872,0.534434810531121,0.0918948995348449,0.752122617877125,0,0.267964130156178,1.65833887891756,0.20686599172379,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0.342233301085281,0.134704106029175,0,0,0.407016343054873,0.106727345877715,1.9307228228694,0.0898252021065869,0,0.488965776731466,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.273748850145768,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0,0.447830948479849,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0.633765858935825,0.637812899895131,0.628975936525128,0.673971786878971,0.600707571366025,0.16072558669708,2.85012743741249,1.79025009479181,0.547992461293902,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0.501559486172034,0.651844533267181,0.473447805734733,0,1.33692548262208,0,0,0,3.5865569523189,1.69077151827842,0,0,0,0.296573126324121,0.535081656179426,0,1.35971211237079,0.383220493601921,0,0,0.318565414324097,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0,0.267440195783507,0,2.43806866313962,0,0,1.0843174571537,0,0.144846518960824,0.795285947051099,0,1.13441780596881,0.665188192387692,0.351339142772504,0.392937226493138,0.728590576585084,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0,0.933633106199299,0.269421344139376,0.653847612453835,0.454072282934794,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0.704606991862589,0.161872944368132,0.280901613404497,0.61246251376468,0.491337269247072,0.516628905878827,0,0,0,0,0.673344455816265,0.750711119231785,0.554128230968366,0,0,0.150238058906597,0,1.4351170855109,0,0.211931901159562,1.20036438433761,0.103052529238439,1.54584324027377,0.18611685633159,0.168776332241266,0,0.504867548488229,0.0920498986422993,0.323292113637624,1.77504796258307,0.604512589365842,0.339121184620975,0.386521706326594,0.545492241181669,0.573609190778008,1.95157929807353,2.91565490307268,1.62671520017326,1.7622379352613,1.26160425437814,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0.492434012174795,0,0,0,0.335964256397719,1.13420077793909,0.626909658919938,0.581267877027924,0,3.94130590316755,0.088048434013226,0.207328115540772,0.144119953416961,0.37872730027914,0.253991577168676,0.381988425558278,1.17217447210047,0,0.719792448923265,0,0.285826432630578,0.672786506072164,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,1.0656887160644,0,1.08524321078289,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,1.27047312111232,1.30139853857622,3.09315525111078,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0.320182673410333,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0.447749509444357,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.137836572484531,1.6113036730241,1.30515024522806,0.426133137080504,0.356128142586949,0,0.192190067365106,0.893288987462089,0.10115778085555,0,0.62962469366128,0.6970372701606,0,0,0,0.18532421910392,0,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0.0982490410131212,0,0.709522128141196,0,0,0.75894634753143,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,1.23408681925858,0,0.540031437238115,1.58625035258854,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,1.03051603426729,0,0,0,0,0,0,1.35227839237992,1.99843180798692,9.86909035614947,0,0.146508179271894,0,0.334330152832435,0,0.23874448473769,0,0,0,0.703347082052564,0.333926115068718,0,0.422250816255987,0,0,1.25966373927138,0.409074730008619,0.123084805461069,0.933118762985422,0,0,0,0,0,0,0,0.185536196323703,5.98841394003583,0,0.349839999984783,0,0.1137934482855,0,0,0,0.291604613383254,0.694499979733169,0,0.723578631752448,3.05163472634166,3.20679853800551,2.06883333267483,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,4.32150372940407,2.48155226678899,2.54881294613061,0.839107934879214,0.37950746544837,3.33766815858795,0,0,0.141353071433941,0.432777279484182,0,0.176915129006678,0,0.593042257361244,0.123563938946503,0.104421949505455,0.134802265961354,0,0.702793337176017,0,0,0,0.394584402849391,1.20990716048664,3.67287313956588,0.063186579628488,0.60129367765797,0.207376382794494,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.225980740780532,0.548167698587004,0.19871461170299,0.886351143382302,0,0,0,0,0,0,0,0,1.49103042678519,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0.687481272035051,0.717873024576814,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,2.57205037544031,3.57602535152808,2.07720169014593,0,0,0.971992906528395,0,0,0.577000469484979,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0.903017728242729,0,0.226624183040251,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.3755727921195,0,0.443716206147409,0.496771223531068,0,0,0,0,0.941063278792687,0,0.144921028610825,0.298509605773748,0.467426619694449,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.450772826991655,0,0,0.181848659202559,0.429642228169954,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.323474434190045,0.157265941855896,0.327628914576042,0,0.212574920101683,0.123935764259002,0,0,0.157723490002507,0.80057074828547,0.352675943690684,0,0.578063025868136,0,0.638535436228605,0.41023272848151,4.53729053199093,0.138314504928436,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0,0.270150338473579,0,0,0.951237152908602,4.92277328116398,0,0,0,0,0.535701835878287,0,0,0.682986574053893,0,0,0.342976018874837,0.203909198930495,0.394636641377094,0,0.111231401892069,0.078493092850514,0.314231179832004,0.280272163313789,1.82631744101899,1.29556554731173,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.971421986118279,0,2.18845852677505,0.118920090777569,0,0.439762066981716,0,0,0,0,0.245148321753905,0.471353094203252,0,0.594092800654172,1.2679671827502,0.169927114687817,0.281951753939561,1.80482086326016,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0.475940431336403,3.9271562130634,0.5290268405154,0,0,0,2.3971620718665,0.327796715891087,0.886889507080059,0.713921808193872,0.534434810531121,0.0918948995348449,0.752122617877125,0,0.267964130156178,1.65833887891756,0.20686599172379,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0.342233301085281,0.134704106029175,0,0,0.407016343054873,0.106727345877715,1.9307228228694,0.0898252021065869,0,0.488965776731466,0,0,0,0 | ||
|short_description=p7@GABBR1 | |||
}} | }} |
Latest revision as of 14:11, 17 September 2015
Short description: | p7@GABBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GABBR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000485508_5end |
EntrezGene: | GABBR1 |
HGNC: | 4070 |
UniProt: | F8WAS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.77e-15 | 5 |
neuronal stem cell | 7.85e-14 | 8 |
neuron | 4.57e-09 | 6 |
neuroblast | 4.57e-09 | 6 |
electrically signaling cell | 4.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.94e-07 | 31 |