FFCP PHASE1:Hg19::chr6:30524253..30524273,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:30524253..30524273,-
|short_description=p2@GNL1
|description=CAGE_peak_2_at_GNL1_5end
|association_with_transcript=28bp_to_uc011dmk.1_5end
|EntrezGene=279...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2794 | |EntrezGene=2794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4413 | |HGNC=4413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc011dmk.1_5end | |||
|cluster_id=chr6:30524253..30524273,- | |||
|description=CAGE_peak_2_at_GNL1_5end | |||
|id=chr6:30524253..30524273,- | |||
|ontology_enrichment_celltype=CL:0000791!6.73e-08!18;CL:0000789!6.73e-08!18;CL:0002420!6.73e-08!18;CL:0002419!6.73e-08!18;CL:0000790!6.73e-08!18;CL:0002057!1.10e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.61e-08;18!CL:0000789;7.61e-08;18!CL:0002419;7.61e-08;18!CL:0000860;7.66e-07;33!CL:0002057;7.66e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.73e-08,18;CL:0000789,6.73e-08,18;CL:0002420,6.73e-08,18;CL:0002419,6.73e-08,18;CL:0000790,6.73e-08,18;CL:0000860,1.10e-07,42;CL:0002057,1.10e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;7.61e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@GNL1 | |||
}} | }} |
Latest revision as of 16:48, 17 September 2015
Short description: | p2@GNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_uc011dmk.1_5end |
EntrezGene: | GNL1 |
HGNC: | 4413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.73e-08 | 18 |
alpha-beta T cell | 6.73e-08 | 18 |
immature T cell | 6.73e-08 | 18 |
mature T cell | 6.73e-08 | 18 |
immature alpha-beta T cell | 6.73e-08 | 18 |
classical monocyte | 1.10e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-07 | 42 |