FFCP PHASE1:Hg19::chr7:1067947..1067965,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:1067947..1067965,-
|short_description=p3@C7orf50
|description=CAGE_peak_3_at_C7orf50_5end
|association_with_transcript=9bp_to_uc003sjs.2,uc003sjv.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84310 | |EntrezGene=84310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22421 | |HGNC=22421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_uc003sjs.2,uc003sjv.2_5end | |||
|cluster_id=chr7:1067947..1067965,- | |||
|description=CAGE_peak_3_at_C7orf50_5end | |||
|id=chr7:1067947..1067965,- | |||
|ontology_enrichment_celltype=CL:0000183!5.18e-12!59;CL:0000187!1.46e-10!54;CL:0000192!1.88e-10!42;CL:0000514!1.88e-10!42;CL:0000055!1.91e-10!180;CL:0000680!5.83e-10!57;CL:0000056!5.83e-10!57;CL:0000355!5.83e-10!57;CL:0000359!1.78e-09!32;CL:0000393!8.33e-09!60;CL:0000211!8.33e-09!60;CL:0000222!1.22e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.90e-09;32!CL:0000192;1.77e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,8.59e-11,55;CL:0000192,1.11e-10,43;CL:0000514,1.11e-10,43;CL:0000680,3.47e-10,58;CL:0000056,3.47e-10,58;CL:0000355,3.47e-10,58;CL:0000359,2.09e-09,32;CL:0000222,5.51e-09,121;CL:0000393,5.89e-09,61;CL:0000211,5.89e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.77e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!9.92e-12!42;UBERON:0003509!9.92e-12!42;UBERON:0004572!9.92e-12!42;UBERON:0001134!1.10e-09!61;UBERON:0002036!1.10e-09!61;UBERON:0003082!1.10e-09!61;UBERON:0004573!1.30e-09!33;UBERON:0004571!1.30e-09!33;UBERON:0002385!9.01e-09!63;UBERON:0001015!9.01e-09!63;UBERON:0000383!9.01e-09!63;UBERON:0001981!9.28e-09!60;UBERON:0007500!9.28e-09!60;UBERON:0004537!9.28e-09!60;UBERON:0006965!9.28e-09!60;UBERON:0004290!6.12e-08!70;UBERON:0000475!2.84e-07!365;UBERON:0000914!3.76e-07!83;UBERON:0002329!3.76e-07!83;UBERON:0003077!3.76e-07!83;UBERON:0003059!3.76e-07!83;UBERON:0007282!3.76e-07!83;UBERON:0009618!3.76e-07!83;UBERON:0007285!3.76e-07!83;UBERON:0000025!4.83e-07!194;UBERON:0004872!7.15e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.81e-09;33!UBERON:0004571;9.81e-09;33!UBERON:0001637;1.96e-08;42!UBERON:0003509;1.96e-08;42!UBERON:0004572;1.96e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.43e-12,42;UBERON:0003509,9.43e-12,42;UBERON:0004572,9.43e-12,42;UBERON:0001134,6.58e-10,62;UBERON:0002036,6.58e-10,62;UBERON:0003082,6.58e-10,62;UBERON:0004573,1.25e-09,33;UBERON:0004571,1.25e-09,33;UBERON:0007503,2.13e-09,78;UBERON:0002385,5.48e-09,64;UBERON:0001015,5.48e-09,64;UBERON:0000383,5.48e-09,64;UBERON:0007524,9.20e-09,73;UBERON:0007500,1.41e-08,59;UBERON:0001981,1.41e-08,59;UBERON:0004537,1.41e-08,59;UBERON:0006965,1.41e-08,59;UBERON:0003077,1.73e-08,72;UBERON:0007285,1.73e-08,72;UBERON:0002329,3.82e-08,71;UBERON:0003059,3.82e-08,71;UBERON:0007282,3.82e-08,71;UBERON:0004290,3.82e-08,71;UBERON:0009618,3.82e-08,71;UBERON:0000025,4.03e-07,192;UBERON:0005256,4.49e-07,122 | |||
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| ||
|short_description=p3@C7orf50 | |||
}} | }} |
Latest revision as of 01:10, 25 September 2015
Short description: | p3@C7orf50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C7orf50_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_uc003sjs.2, uc003sjv.2_5end |
EntrezGene: | C7orf50 |
HGNC: | 22421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 8.59e-11 | 55 |
smooth muscle cell | 1.11e-10 | 43 |
smooth muscle myoblast | 1.11e-10 | 43 |
muscle precursor cell | 3.47e-10 | 58 |
myoblast | 3.47e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.47e-10 | 58 |
vascular associated smooth muscle cell | 2.09e-09 | 32 |
mesodermal cell | 5.51e-09 | 121 |
electrically responsive cell | 5.89e-09 | 61 |
electrically active cell | 5.89e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
artery | 9.43e-12 | 42 |
arterial blood vessel | 9.43e-12 | 42 |
arterial system | 9.43e-12 | 42 |
skeletal muscle tissue | 6.58e-10 | 62 |
striated muscle tissue | 6.58e-10 | 62 |
myotome | 6.58e-10 | 62 |
systemic artery | 1.25e-09 | 33 |
systemic arterial system | 1.25e-09 | 33 |
epithelial vesicle | 2.13e-09 | 78 |
muscle tissue | 5.48e-09 | 64 |
musculature | 5.48e-09 | 64 |
musculature of body | 5.48e-09 | 64 |
dense mesenchyme tissue | 9.20e-09 | 73 |
epithelial tube open at both ends | 1.41e-08 | 59 |
blood vessel | 1.41e-08 | 59 |
blood vasculature | 1.41e-08 | 59 |
vascular cord | 1.41e-08 | 59 |
paraxial mesoderm | 1.73e-08 | 72 |
presumptive paraxial mesoderm | 1.73e-08 | 72 |
somite | 3.82e-08 | 71 |
presomitic mesoderm | 3.82e-08 | 71 |
presumptive segmental plate | 3.82e-08 | 71 |
dermomyotome | 3.82e-08 | 71 |
trunk paraxial mesoderm | 3.82e-08 | 71 |
tube | 4.03e-07 | 192 |
trunk mesenchyme | 4.49e-07 | 122 |