FFCP PHASE1:Hg19::chr7:155005898..155005912,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:155005898..155005912,+
|short_description=p@chr7:155005898..155005912,+
|description=CAGE_peak_at_chr7:155005898..155005912,+
|association_with_transcript=...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:155005898..155005912,+ | |||
|description=CAGE_peak_at_chr7:155005898..155005912,+ | |||
|id=chr7:155005898..155005912,+ | |||
|ontology_enrichment_celltype=CL:0002334!1.41e-17!12;CL:0002580!6.35e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.98e-34;12!CL:0002580;6.26e-21;3!CL:0002579;2.97e-20;3!CL:0002570;1.18e-13;8!CL:0000515;2.62e-09;3!CL:0002568;6.30e-08;1!CL:0002581;6.30e-08;1!CL:0002616;1.35e-07;1!CL:0000056;3.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.13e-34,12;CL:0002580,4.97e-21,3;CL:0002579,2.61e-20,3;CL:0002570,1.18e-13,8;CL:0000136,1.11e-10,15;CL:0002581,4.66e-08,1;CL:0002568,7.45e-08,1;CL:0002616,1.11e-07,1;CL:0000515,2.67e-07,4;CL:0000057,6.81e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.67e-08;1!UBERON:0008801;6.30e-08;1!CL:0000515;3.44e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;6.30e-08;1!DOID:4235;6.30e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,5.33e-08,1;DOID:4235,8.51e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.06e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.74e-18;9!UBERON:0000042;6.74e-18;9!UBERON:0003688;1.72e-17;6!UBERON:0002358;1.72e-17;6!UBERON:0003684;1.72e-17;6!UBERON:0001178;1.72e-17;6!UBERON:0001013;1.62e-16;14!UBERON:0001829;2.15e-14;2!UBERON:0005406;7.79e-14;2!UBERON:0000310;8.02e-11;10!UBERON:0001443;7.55e-10;11!UBERON:0001736;3.67e-08;1!UBERON:0001831;6.30e-08;1!UBERON:0001567;6.30e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.72e-17,6;UBERON:0002358,1.72e-17,6;UBERON:0003684,1.72e-17,6;UBERON:0001178,1.72e-17,6;UBERON:0001013,1.33e-16,14;UBERON:0001829,2.31e-14,2;UBERON:0005406,4.77e-14,2;UBERON:0004457,2.24e-13,12;UBERON:0000042,2.24e-13,12;UBERON:0000310,7.35e-11,10;UBERON:0001443,6.97e-10,11;UBERON:0001736,4.07e-08,1;UBERON:0006298,4.07e-08,1;UBERON:0001831,6.10e-08,1;UBERON:0001567,6.10e-08,1;UBERON:0008801,6.10e-08,1;UBERON:0002384,7.03e-07,371 | |||
|phase1_expression=1.63510541343501,0.642301571672949,1.26858963686374,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,1.0246428261164,0.945928919554341,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0.622822248995575,0,1.0429658368404,0.434377689410233,0,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1811437882044,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0.257640540045629,0,0.675105328965065,1.16924406193438,0.504867548488229,0.276149695926898,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0,0.653638332277218,0.71181185733329,0,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06834745212444,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.73737568001095,0.205476322550383,1.96967059563885,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,5.45837177201309,3.52962538562544,2.52594084989766,3.58789617915963,2.04682899626681,1.93024705372329,2.96836132889982,0.616838775210622,1.9531789784444,0.574890092096664,0,0.464841513839837,0,0,0,0,0,0.131124414959424,0.451199612907412,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.773365746336976,0,0.15350367472613,0,0,0,0.0852266274161009,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.179515288819544,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08956724041624,2.33713309847224,0,0,0,0,0,0,0.466311601748341,0,0.318593534327405,0,0,0.829412415681711,0.265841714557995,0,0,0,0,3.63697318405119,0.214821114084977,0.928067519756987,0,0.400027764663154,5.49433128292469,3.36749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,2.19303106742873,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0,0.9164274741762,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0.4226557275834,2.0391253762538,0,0,0,0,0,0,0,3.21110498383179,0,0,0,0,0,0.371995018166751,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0,0,0,0,0,0,0,0,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | |phase1_expression=1.63510541343501,0.642301571672949,1.26858963686374,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,1.0246428261164,0.945928919554341,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0.622822248995575,0,1.0429658368404,0.434377689410233,0,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1811437882044,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0.257640540045629,0,0.675105328965065,1.16924406193438,0.504867548488229,0.276149695926898,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0,0.653638332277218,0.71181185733329,0,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06834745212444,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.73737568001095,0.205476322550383,1.96967059563885,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,5.45837177201309,3.52962538562544,2.52594084989766,3.58789617915963,2.04682899626681,1.93024705372329,2.96836132889982,0.616838775210622,1.9531789784444,0.574890092096664,0,0.464841513839837,0,0,0,0,0,0.131124414959424,0.451199612907412,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.773365746336976,0,0.15350367472613,0,0,0,0.0852266274161009,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.179515288819544,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08956724041624,2.33713309847224,0,0,0,0,0,0,0.466311601748341,0,0.318593534327405,0,0,0.829412415681711,0.265841714557995,0,0,0,0,3.63697318405119,0.214821114084977,0.928067519756987,0,0.400027764663154,5.49433128292469,3.36749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,2.19303106742873,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0,0.9164274741762,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0.4226557275834,2.0391253762538,0,0,0,0,0,0,0,3.21110498383179,0,0,0,0,0,0.371995018166751,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0,0,0,0,0,0,0,0,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:155005898..155005912,+ | |||
}} | }} |
Latest revision as of 07:54, 31 July 2015
Short description: | p@chr7:155005898..155005912, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:155005898..155005912, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.13e-34 | 12 |
preadipocyte of the breast | 4.97e-21 | 3 |
omentum preadipocyte | 2.61e-20 | 3 |
mesenchymal stem cell of adipose | 1.18e-13 | 8 |
fat cell | 1.11e-10 | 15 |
perirenal preadipocyte | 4.66e-08 | 1 |
mesenchymal stem cell of Wharton's jelly | 7.45e-08 | 1 |
perirenal adipocyte cell | 1.11e-07 | 1 |
skeletal muscle myoblast | 2.67e-07 | 4 |
fibroblast | 6.81e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.72e-17 | 6 |
peritoneum | 1.72e-17 | 6 |
abdominal cavity | 1.72e-17 | 6 |
visceral peritoneum | 1.72e-17 | 6 |
adipose tissue | 1.33e-16 | 14 |
major salivary gland | 2.31e-14 | 2 |
perirenal fat | 4.77e-14 | 2 |
cavity lining | 2.24e-13 | 12 |
serous membrane | 2.24e-13 | 12 |
breast | 7.35e-11 | 10 |
chest | 6.97e-10 | 11 |
submandibular gland | 4.07e-08 | 1 |
submandibular gland primordium | 4.07e-08 | 1 |
parotid gland | 6.10e-08 | 1 |
cheek | 6.10e-08 | 1 |
parotid gland primordium | 6.10e-08 | 1 |
connective tissue | 7.03e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 5.33e-08 | 1 |
spindle cell sarcoma | 8.51e-08 | 1 |