FFCP PHASE1:Hg19::chr7:81399311..81399323,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=3082 | |EntrezGene=3082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4893 | |HGNC=4893 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465234_5end | |association_with_transcript=0bp_to_ENST00000465234_5end | ||
|cluster_id=chr7:81399311..81399323,- | |||
|coexpression_cluster_id=C2904 | |coexpression_cluster_id=C2904 | ||
|description=CAGE_peak_6_at_HGF_5end | |description=CAGE_peak_6_at_HGF_5end |
Latest revision as of 18:04, 19 September 2015
Short description: | p6@HGF |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HGF_5end |
Coexpression cluster: | C2904_Mesenchymal_adenocarcinoma_Cardiac_small_sacrococcigeal_Preadipocyte_Smooth |
Association with transcript: | 0bp_to_ENST00000465234_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@HGF |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.52e-28 | 58 |
myoblast | 9.52e-28 | 58 |
multi-potent skeletal muscle stem cell | 9.52e-28 | 58 |
muscle cell | 4.75e-27 | 55 |
electrically responsive cell | 3.90e-24 | 61 |
electrically active cell | 3.90e-24 | 61 |
smooth muscle cell | 6.98e-18 | 43 |
smooth muscle myoblast | 6.98e-18 | 43 |
multi fate stem cell | 4.06e-13 | 427 |
somatic stem cell | 1.83e-12 | 433 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.29e-25 | 73 |
muscle tissue | 2.59e-25 | 64 |
musculature | 2.59e-25 | 64 |
musculature of body | 2.59e-25 | 64 |
somite | 3.85e-25 | 71 |
presomitic mesoderm | 3.85e-25 | 71 |
presumptive segmental plate | 3.85e-25 | 71 |
dermomyotome | 3.85e-25 | 71 |
trunk paraxial mesoderm | 3.85e-25 | 71 |
skeletal muscle tissue | 5.70e-25 | 62 |
Showing 1 to 10 of 46 entries