FFCP PHASE1:Hg19::chr10:100174900..100174956,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84795 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23517 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N2H3 | |||
|association_with_transcript=0bp_to_ENST00000370575,ENST00000462874_5end | |||
|cluster_id=chr10:100174900..100174956,- | |||
|description=CAGE_peak_1_at_PYROXD2_5end | |||
|id=chr10:100174900..100174956,- | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-14!180;CL:0000057!2.36e-10!75;CL:0000183!2.37e-10!59;CL:0000192!9.14e-10!42;CL:0000514!9.14e-10!42;CL:0000680!1.33e-09!57;CL:0000056!1.33e-09!57;CL:0000355!1.33e-09!57;CL:0000187!2.20e-09!54;CL:0000359!2.30e-07!32;CL:0000393!6.45e-07!60;CL:0000211!6.45e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.12e-07;43!CL:0000359;3.83e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.12e-10,76;CL:0000192,3.87e-10,43;CL:0000514,3.87e-10,43;CL:0000680,5.89e-10,58;CL:0000056,5.89e-10,58;CL:0000355,5.89e-10,58;CL:0000187,9.79e-10,55;CL:0000359,2.17e-07,32;CL:0000393,2.65e-07,61;CL:0000211,2.65e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.59e-15!365;UBERON:0005256!1.29e-13!143;UBERON:0000914!3.74e-11!83;UBERON:0002329!3.74e-11!83;UBERON:0003077!3.74e-11!83;UBERON:0003059!3.74e-11!83;UBERON:0007282!3.74e-11!83;UBERON:0009618!3.74e-11!83;UBERON:0007285!3.74e-11!83;UBERON:0000481!5.57e-11!347;UBERON:0002100!1.57e-10!216;UBERON:0001134!3.97e-10!61;UBERON:0002036!3.97e-10!61;UBERON:0003082!3.97e-10!61;UBERON:0004290!5.68e-10!70;UBERON:0002385!7.15e-10!63;UBERON:0001015!7.15e-10!63;UBERON:0000383!7.15e-10!63;UBERON:0000486!2.78e-09!82;UBERON:0000477!8.02e-08!286;UBERON:0003104!2.52e-07!238;UBERON:0009142!2.52e-07!238;UBERON:0000490!2.82e-07!138;UBERON:0000119!4.23e-07!312;UBERON:0000483!5.98e-07!309 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,3.07e-12,122;UBERON:0003104,6.57e-12,160;UBERON:0009142,6.57e-12,160;UBERON:0001134,1.75e-10,62;UBERON:0002036,1.75e-10,62;UBERON:0003082,1.75e-10,62;UBERON:0002329,2.99e-10,71;UBERON:0003059,2.99e-10,71;UBERON:0007282,2.99e-10,71;UBERON:0004290,2.99e-10,71;UBERON:0009618,2.99e-10,71;UBERON:0002385,3.20e-10,64;UBERON:0001015,3.20e-10,64;UBERON:0000383,3.20e-10,64;UBERON:0007524,3.24e-10,73;UBERON:0003077,5.74e-10,72;UBERON:0007285,5.74e-10,72;UBERON:0007503,7.91e-10,78;UBERON:0000486,1.37e-09,83;UBERON:0002100,1.47e-08,199;UBERON:0000119,6.09e-08,309;UBERON:0000483,8.79e-08,306;UBERON:0000490,9.14e-08,148 | |||
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| |||
|short_description=p1@PYROXD2 | |||
}} |
Latest revision as of 17:48, 15 September 2015
Short description: | p1@PYROXD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PYROXD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370575, ENST00000462874_5end |
EntrezGene: | PYROXD2 |
HGNC: | 23517 |
UniProt: | Q8N2H3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.12e-10 | 76 |
smooth muscle cell | 3.87e-10 | 43 |
smooth muscle myoblast | 3.87e-10 | 43 |
muscle precursor cell | 5.89e-10 | 58 |
myoblast | 5.89e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.89e-10 | 58 |
muscle cell | 9.79e-10 | 55 |
vascular associated smooth muscle cell | 2.17e-07 | 32 |
electrically responsive cell | 2.65e-07 | 61 |
electrically active cell | 2.65e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 3.07e-12 | 122 |
mesenchyme | 6.57e-12 | 160 |
entire embryonic mesenchyme | 6.57e-12 | 160 |
skeletal muscle tissue | 1.75e-10 | 62 |
striated muscle tissue | 1.75e-10 | 62 |
myotome | 1.75e-10 | 62 |
somite | 2.99e-10 | 71 |
presomitic mesoderm | 2.99e-10 | 71 |
presumptive segmental plate | 2.99e-10 | 71 |
dermomyotome | 2.99e-10 | 71 |
trunk paraxial mesoderm | 2.99e-10 | 71 |
muscle tissue | 3.20e-10 | 64 |
musculature | 3.20e-10 | 64 |
musculature of body | 3.20e-10 | 64 |
dense mesenchyme tissue | 3.24e-10 | 73 |
paraxial mesoderm | 5.74e-10 | 72 |
presumptive paraxial mesoderm | 5.74e-10 | 72 |
epithelial vesicle | 7.91e-10 | 78 |
multilaminar epithelium | 1.37e-09 | 83 |
trunk | 1.47e-08 | 199 |
cell layer | 6.09e-08 | 309 |
epithelium | 8.79e-08 | 306 |
unilaminar epithelium | 9.14e-08 | 148 |