FFCP PHASE1:Hg19::chr10:14418841..14418854,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:14418841..14418854,+ | |||
|coexpression_cluster_id=C322 | |||
|description=CAGE_peak_at_chr10:14418841..14418854,+ | |||
|id=chr10:14418841..14418854,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.15e-27!19;CL:0000213!2.88e-08!57;CL:0000215!2.88e-08!57;CL:0000864!4.71e-08!1;CL:0000091!4.71e-08!1;CL:0000076!1.74e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.25e-17;19!CL:1000415;2.60e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.26e-17,19;CL:1000415,3.35e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.83e-17;5!UBERON:0006238;3.25e-08;10 | |||
|ontology_enrichment_disease=DOID:3112!2.04e-08!1;DOID:162!2.20e-08!235;DOID:5662!3.58e-08!1;DOID:14566!3.99e-08!239;DOID:3369!4.11e-08!1;DOID:3571!4.71e-08!1;DOID:4235!7.10e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3112;3.12e-21;1!DOID:3093;1.33e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.82e-21,1;DOID:3093,1.24e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.06e-07!1;UBERON:0009842!1.06e-07!1;UBERON:0003704!1.06e-07!1;UBERON:0001171!1.06e-07!1;UBERON:0001172!1.06e-07!1;UBERON:0001280!1.81e-07!4;UBERON:0004647!1.81e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.83e-17;5!UBERON:0002110;5.73e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.64e-17,5;UBERON:0004117,4.64e-17,5;UBERON:0007689,4.64e-17,5;UBERON:0007123,4.64e-17,5;UBERON:0003091,4.64e-17,5;UBERON:0009722,2.82e-08,11;UBERON:0007690,2.82e-08,11;UBERON:0002110,6.78e-08,3;UBERON:0006242,6.78e-08,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,2.61460037580088,3.69900067373611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04603516955828,0,0,0,0,0,0,0,0,3.80531777006119,3.13808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0.782982875895635,0.226705925512272,0,0,0,0,3.0699766941019,0,2.50788249752189,0.506827321959218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,3.43921026771203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,12.3345048838675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:14418841..14418854,+ | |||
}} |
Latest revision as of 12:00, 23 July 2015
Short description: | p@chr10:14418841..14418854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:14418841..14418854, + |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.26e-17 | 19 |
epithelial cell of gall bladder | 3.35e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.64e-17 | 5 |
pharyngeal pouch | 4.64e-17 | 5 |
thyroid diverticulum | 4.64e-17 | 5 |
pharyngeal pouch 2 | 4.64e-17 | 5 |
thyroid primordium | 4.64e-17 | 5 |
entire pharyngeal arch endoderm | 2.82e-08 | 11 |
early pharyngeal endoderm | 2.82e-08 | 11 |
gallbladder | 6.78e-08 | 3 |
gall bladder primordium | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.82e-21 | 1 |
nervous system cancer | 1.24e-07 | 11 |