FFCP PHASE1:Hg19::chr11:102651279..102651288,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4319 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7156 | |||
|TSSclassifier=strong | |||
|UniProt=P09238 | |||
|association_with_transcript=33bp_to_BT007442,DQ891931,DQ895118_5end | |||
|cluster_id=chr11:102651279..102651288,- | |||
|coexpression_cluster_id=C556 | |||
|description=CAGE_peak_2_at_MMP10_5end | |||
|id=chr11:102651279..102651288,- | |||
|ontology_enrichment_celltype=CL:0000066!8.90e-13!254;CL:0000076!2.72e-11!62;CL:0000071!7.14e-11!18;CL:0002546!7.14e-11!18;CL:0002076!2.98e-09!43;CL:0000220!3.27e-09!246;CL:0002139!3.89e-09!24;CL:0002321!4.97e-09!248;CL:0002159!7.74e-09!13;CL:0002166!2.40e-07!3;CL:0002621!3.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.94e-17;3!CL:0002251;1.31e-09;20!CL:0002159;1.54e-09;14!CL:0002076;2.26e-09;42!CL:0002621;1.36e-08;3!CL:1001319;3.51e-07;1!CL:1000600;3.51e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.29e-17,3;CL:0002076,1.94e-11,42;CL:0000066,2.86e-11,253;CL:0002251,1.15e-09,20;CL:0000223,1.55e-09,58;CL:0002159,1.63e-09,14;CL:0002621,1.22e-08,3;CL:1001319,3.52e-07,1;CL:1000600,3.52e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!8.36e-10!27;DOID:193!6.74e-09!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.14e-11!18;UBERON:0004638!7.14e-11!18;UBERON:0004852!7.14e-11!18;UBERON:0003100!1.28e-09!41;UBERON:0003134!1.89e-08!37;UBERON:0000474!1.89e-08!37;UBERON:0000487!2.02e-08!22;UBERON:0004872!7.41e-08!84;UBERON:0001981!2.80e-07!60;UBERON:0007500!2.80e-07!60;UBERON:0004537!2.80e-07!60;UBERON:0006965!2.80e-07!60;UBERON:0001949!3.33e-07!3;UBERON:0006914!4.13e-07!25;UBERON:0000365!4.72e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;4.46e-13;4!UBERON:0008895;4.46e-13;4!UBERON:0003343;5.36e-13;4!UBERON:0004785;5.36e-13;4!UBERON:0000486;1.95e-11;12!UBERON:0003729;1.41e-10;13!UBERON:0011159;1.47e-10;5!UBERON:0000365;1.97e-10;5!UBERON:0000344;1.37e-09;20!UBERON:0000974;8.01e-09;6!UBERON:0005910;9.04e-09;6!UBERON:0001949;1.36e-08;3!UBERON:0004645;3.51e-07;1!UBERON:0001256;3.51e-07;1!UBERON:0001259;3.51e-07;1!UBERON:0000161;3.78e-07;19!UBERON:0000166;3.78e-07;19!UBERON:0003350;5.28e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,4.29e-13,4;UBERON:0004785,4.29e-13,4;UBERON:0001708,4.85e-13,4;UBERON:0008895,4.85e-13,4;UBERON:0003729,1.19e-10,13;UBERON:0011159,1.57e-10,5;UBERON:0000365,1.68e-10,5;UBERON:0000344,1.20e-09,20;UBERON:0010188,7.51e-09,6;UBERON:0002539,7.51e-09,6;UBERON:0008816,7.51e-09,6;UBERON:0005910,7.92e-09,6;UBERON:0001949,1.22e-08,3;UBERON:0004645,3.52e-07,1;UBERON:0001256,3.52e-07,1;UBERON:0001259,3.52e-07,1;UBERON:0003350,4.98e-07,8;UBERON:0000161,9.12e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0.521482918420201,0.434377689410233,0,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0,0,0.275118041940067,0.417989933073621,0,0,0,2.81980521976403,0,0.732186172644509,0,0,0.267899184852239,0,0.225222960966644,3.06633274931766,0,1.46561395144326,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86521706326594,6.2731607735892,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,1.1240175325762,0.201057944823262,0,0,0,0,0,0,1.44366447761074,0,0,0,0,0,0,0,3.74935335947108,1.17587489739202,3.1190521393325,0.895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0.184161977871793,0,0,0,0.451199612907412,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,3.30569830721956,1.53752053892085,0,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,0,0,0,0,0.288666338176536,0,0,0,0,1.68471475667626,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27673408723686,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,1.84083628503879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,1.55715908783166,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23959090048732,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.277349346026277,1.38847790668105,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.6958077724654,0,1.4405479798815,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0,0,0,1.017074150619,0,0,0.326587360109409,0,1.06720276974141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,1.04349012362347,0,0,0.813741466409323,0.909243296012797,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66851121451744,3.06721280704125,2.20114318226015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.294197647767,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.62041277132864,0,0.111855431797792,0,0,0,0,0,0,0,0,15.2217716195288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0.358611026963382,0.665320713092027,8.38453666693037,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@MMP10 | |||
}} |
Latest revision as of 18:00, 24 September 2015
Short description: | p2@MMP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMP10_5end |
Coexpression cluster: | C556_pharyngeal_Gingival_Retinal_lung_Mallassezderived_Small_mesothelioma |
Association with transcript: | 33bp_to_BT007442, DQ891931, DQ895118_5end |
EntrezGene: | MMP10 |
HGNC: | 7156 |
UniProt: | P09238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.29e-17 | 3 |
endo-epithelial cell | 1.94e-11 | 42 |
epithelial cell | 2.86e-11 | 253 |
epithelial cell of alimentary canal | 1.15e-09 | 20 |
endodermal cell | 1.55e-09 | 58 |
general ecto-epithelial cell | 1.63e-09 | 14 |
gingival epithelial cell | 1.22e-08 | 3 |
bladder cell | 3.52e-07 | 1 |
lower urinary tract cell | 3.52e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 4.29e-13 | 4 |
respiratory system mucosa | 4.29e-13 | 4 |
jaw skeleton | 4.85e-13 | 4 |
splanchnocranium | 4.85e-13 | 4 |
mouth mucosa | 1.19e-10 | 13 |
primary subdivision of cranial skeletal system | 1.57e-10 | 5 |
urothelium | 1.68e-10 | 5 |
mucosa | 1.20e-09 | 20 |
protuberance | 7.51e-09 | 6 |
pharyngeal arch | 7.51e-09 | 6 |
embryonic head | 7.51e-09 | 6 |
transitional epithelium | 7.92e-09 | 6 |
gingival epithelium | 1.22e-08 | 3 |
urinary bladder urothelium | 3.52e-07 | 1 |
wall of urinary bladder | 3.52e-07 | 1 |
mucosa of urinary bladder | 3.52e-07 | 1 |
epithelium of mucosa | 4.98e-07 | 8 |
orifice | 9.12e-07 | 36 |