FFCP PHASE1:Hg19::chr11:2022489..2022501,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=198bp_to_ENST00000428066_5end | |||
|cluster_id=chr11:2022489..2022501,- | |||
|coexpression_cluster_id=C232 | |||
|description=CAGE_peak_37_at_H19_5end | |||
|id=chr11:2022489..2022501,- | |||
|ontology_enrichment_celltype=CL:0002322!2.64e-12!5;CL:0002159!4.18e-07!13;CL:0002077!8.56e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.04e-53;5!CL:0002321;5.54e-18;15!CL:0002336;8.72e-18;1!CL:0002261;8.72e-18;1!CL:0002170;8.72e-18;1!CL:0000148;1.42e-15;10!CL:0000147;2.62e-11;14!CL:0000317;1.44e-09;2!CL:1000448;1.44e-09;2!CL:0002308;1.44e-09;2!CL:0002140;1.44e-09;2!CL:0000710;4.35e-08;20!CL:0002077;1.02e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.10e-53,5;CL:0002336,1.70e-17,1;CL:0002261,1.70e-17,1;CL:0002170,1.70e-17,1;CL:0000148,1.36e-15,10;CL:0000541,1.36e-15,10;CL:0000147,2.53e-11,14;CL:0000317,1.57e-09,2;CL:1000448,1.57e-09,2;CL:0002308,1.57e-09,2;CL:0002140,1.57e-09,2;CL:0002077,4.13e-08,34;CL:0000710,4.25e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0010226;8.72e-18;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.79e-21!57;UBERON:0005068!3.79e-21!57;UBERON:0006241!3.79e-21!57;UBERON:0007135!3.79e-21!57;UBERON:0002020!2.25e-19!34;UBERON:0003528!2.25e-19!34;UBERON:0002780!6.35e-19!41;UBERON:0001890!6.35e-19!41;UBERON:0006240!6.35e-19!41;UBERON:0007023!7.35e-19!115;UBERON:0001869!9.45e-19!32;UBERON:0002616!1.67e-18!59;UBERON:0003080!2.48e-18!42;UBERON:0003075!2.17e-17!86;UBERON:0007284!2.17e-17!86;UBERON:0001893!2.31e-17!34;UBERON:0000955!4.12e-17!69;UBERON:0006238!4.12e-17!69;UBERON:0003056!3.11e-16!61;UBERON:0002346!3.28e-16!90;UBERON:0002791!5.45e-16!33;UBERON:0000033!7.99e-16!123;UBERON:0005743!1.27e-15!86;UBERON:0001017!1.56e-15!82;UBERON:0002619!3.27e-15!22;UBERON:0000153!1.35e-14!129;UBERON:0007811!1.35e-14!129;UBERON:0000073!1.94e-14!94;UBERON:0001016!1.94e-14!94;UBERON:0000956!5.09e-13!25;UBERON:0000203!5.09e-13!25;UBERON:0001950!2.14e-12!20;UBERON:0004121!2.16e-12!169;UBERON:0000924!7.63e-12!173;UBERON:0006601!7.63e-12!173;UBERON:0000200!3.34e-09!6;UBERON:0000025!1.05e-08!194;UBERON:0000481!1.26e-08!347;UBERON:0000475!4.03e-08!365;UBERON:0002308!4.73e-08!9;UBERON:0000125!4.73e-08!9;UBERON:0004111!5.35e-08!241;UBERON:0002771!1.61e-07!3;UBERON:0000477!3.03e-07!286;UBERON:0000988!3.77e-07!3;UBERON:0000349!6.49e-07!5;UBERON:0001871!8.54e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;8.72e-18;1!UBERON:0002082;8.72e-18;1!UBERON:0002419;1.44e-09;2!UBERON:0007771;1.44e-09;2!UBERON:0003297;1.44e-09;2!UBERON:0001821;1.44e-09;2!UBERON:0003487;1.44e-09;2!UBERON:0001820;1.44e-09;2!UBERON:0004151;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,8.72e-18,1;UBERON:0002082,8.72e-18,1;UBERON:0010226,8.72e-18,1;UBERON:0002419,1.57e-09,2;UBERON:0007771,1.57e-09,2;UBERON:0003297,1.57e-09,2;UBERON:0001821,1.57e-09,2;UBERON:0003487,1.57e-09,2;UBERON:0001820,1.57e-09,2;UBERON:0005089,1.57e-09,2;UBERON:0005088,1.57e-09,2;UBERON:0004151,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0.573609190778008,0.853815942907168,1.98794652482228,1.62671520017326,1.14027160516907,3.02785021050754,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,1.14853107599234,0,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.699869440489966,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.716084698702437,0,0.197286811273867,0,0,0,0.74214478529481,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,0,0.904980694530854,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.500763722825999,0,0.221858103073705,0.372578417648301,0,0.124980407962107,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.957803154342908,0,0,0.276629009856872,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0.472763092328763,0,1.03343398250592,0.824405532520789,0,0,0,0,0,0.535701835878287,0,0,0.682986574053893,0,0,0,0.883606528698812,0.460409414939944,0,0,0,0.628462359664008,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.815897882290976,0,0,0,0,0,1.38783067318587,5.79107531407586,0,0.815910637935854,0,0.275684698604535,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p37@H19 | |||
}} |
Latest revision as of 06:59, 17 September 2015
Short description: | p37@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_H19_5end |
Coexpression cluster: | C232_teratocarcinoma_HES3GFP_H9_iPS_testicular_neuroblastoma_cerebellum |
Association with transcript: | 198bp_to_ENST00000428066_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.10e-53 | 5 |
buccal mucosa cell | 1.70e-17 | 1 |
endothelial cell of viscerocranial mucosa | 1.70e-17 | 1 |
keratinized cell of the oral mucosa | 1.70e-17 | 1 |
melanocyte | 1.36e-15 | 10 |
melanoblast | 1.36e-15 | 10 |
pigment cell | 2.53e-11 | 14 |
sebum secreting cell | 1.57e-09 | 2 |
epithelial cell of sweat gland | 1.57e-09 | 2 |
epithelial cell of skin gland | 1.57e-09 | 2 |
acinar cell of sebaceous gland | 1.57e-09 | 2 |
ecto-epithelial cell | 4.13e-08 | 34 |
neurecto-epithelial cell | 4.25e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 8.72e-18 | 1 |
cardiac ventricle | 8.72e-18 | 1 |
future cardiac ventricle | 8.72e-18 | 1 |
skin gland | 1.57e-09 | 2 |
epidermis gland | 1.57e-09 | 2 |
gland of integumental system | 1.57e-09 | 2 |
sebaceous gland | 1.57e-09 | 2 |
skin sebaceous gland | 1.57e-09 | 2 |
sweat gland | 1.57e-09 | 2 |
sweat gland placode | 1.57e-09 | 2 |
sebaceous gland placode | 1.57e-09 | 2 |
cardiac chamber | 8.62e-07 | 3 |