FFCP PHASE1:Hg19::chr11:47293795..47293821,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8567 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6766 | |||
|TSSclassifier=strong | |||
|UniProt=C9JLZ9 | |||
|association_with_transcript=0bp_to_ENST00000422579_5end | |||
|cluster_id=chr11:47293795..47293821,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_13_at_MADD_5end | |||
|id=chr11:47293795..47293821,+ | |||
|ontology_enrichment_celltype=CL:0002150!8.94e-10!3;CL:0000861!8.94e-10!3;CL:0000819!3.10e-08!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease=DOID:0060073!3.10e-08!1;DOID:8675!3.10e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000988!4.73e-10!3;UBERON:0003296!3.97e-08!4;UBERON:0010133!3.97e-08!4;UBERON:0002680!2.45e-07!9;UBERON:0001895!2.45e-07!9;UBERON:0010092!2.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.66e-21;2!UBERON:0002757;4.66e-21;2!UBERON:0010134;4.66e-21;2!UBERON:0005408;4.66e-21;2!UBERON:0001899;4.66e-21;2!UBERON:0003296;3.10e-11;4!UBERON:0010133;3.10e-11;4!UBERON:0002784;3.10e-11;4!UBERON:0000966;2.53e-09;5!UBERON:0005388;2.53e-09;5!UBERON:0001802;2.53e-09;5!UBERON:0000970;5.48e-09;20!UBERON:0002104;1.32e-08;21!UBERON:0000020;6.08e-08;23!UBERON:0001032;1.19e-07;24!UBERON:0004456;1.19e-07;24!UBERON:0001894;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.70e-21,2;UBERON:0002757,5.70e-21,2;UBERON:0010134,5.70e-21,2;UBERON:0005408,5.70e-21,2;UBERON:0001899,5.70e-21,2;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0002784,3.42e-11,4;UBERON:0000970,1.27e-08,21;UBERON:0002104,1.27e-08,21;UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6;UBERON:0000020,1.15e-07,24;UBERON:0001032,1.15e-07,24;UBERON:0004456,1.15e-07,24;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,2.71176888936639,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35398605553177,0,0.455324382702595,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,3.71678029718613,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.985123076837112,2.41167717140561,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@MADD | |||
}} |
Latest revision as of 04:20, 18 September 2015
Short description: | p13@MADD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MADD_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000422579_5end |
EntrezGene: | MADD |
HGNC: | 6766 |
UniProt: | C9JLZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.70e-21 | 2 |
regional part of epithalamus | 5.70e-21 | 2 |
secretory circumventricular organ | 5.70e-21 | 2 |
circumventricular organ | 5.70e-21 | 2 |
epithalamus | 5.70e-21 | 2 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
regional part of diencephalon | 3.42e-11 | 4 |
eye | 1.27e-08 | 21 |
visual system | 1.27e-08 | 21 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
sense organ | 1.15e-07 | 24 |
sensory system | 1.15e-07 | 24 |
entire sense organ system | 1.15e-07 | 24 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |