FFCP PHASE1:Hg19::chr11:94226943..94226952,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4361 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7230 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENST00000536550_5end | |||
|cluster_id=chr11:94226943..94226952,- | |||
|description=CAGE_peak_3_at_MRE11A_5end | |||
|id=chr11:94226943..94226952,- | |||
|ontology_enrichment_celltype=CL:0002251!4.65e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000222;1.31e-14;1!CL:1001319;1.31e-14;1!CL:1000600;1.31e-14;1!CL:0002253;5.94e-08;2!CL:0002535;5.94e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.23e-14,1;CL:1000600,1.23e-14,1;CL:0002535,5.02e-08,2;CL:0002253,8.60e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.52e-23!235;DOID:14566!1.01e-22!239;DOID:0050687!1.16e-16!143;DOID:305!5.16e-15!106;DOID:0050686!9.57e-09!137;DOID:2531!4.58e-07!51;DOID:0060083!4.58e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.52e-12;10!DOID:4362;1.42e-11;5!DOID:1749;4.01e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.27e-12,10;DOID:4362,1.50e-11,5;DOID:1749,3.96e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.31e-14;1!UBERON:0001256;1.31e-14;1!UBERON:0001259;1.31e-14;1!UBERON:0000002;8.46e-10;6!UBERON:0001560;8.46e-10;6!UBERON:0000485;1.20e-08;7!UBERON:0001255;5.94e-08;2!UBERON:0006955;5.94e-08;2!UBERON:0004801;5.94e-08;2!UBERON:0001556;5.94e-08;2!UBERON:0003350;1.44e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.23e-14,1;UBERON:0001256,1.23e-14,1;UBERON:0001259,1.23e-14,1;UBERON:0000002,8.86e-10,6;UBERON:0001560,8.86e-10,6;UBERON:0006955,5.02e-08,2;UBERON:0004801,5.02e-08,2;UBERON:0001255,5.74e-08,2;UBERON:0001556,5.74e-08,2;UBERON:0003350,1.70e-07,8;UBERON:0000485,7.64e-07,9 | |||
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| |||
|short_description=p3@MRE11A | |||
}} |
Latest revision as of 03:24, 25 September 2015
Short description: | p3@MRE11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRE11A_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000536550_5end |
EntrezGene: | MRE11A |
HGNC: | 7230 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.23e-14 | 1 |
lower urinary tract cell | 1.23e-14 | 1 |
epithelial cell of cervix | 5.02e-08 | 2 |
epithelial cell of large intestine | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.23e-14 | 1 |
wall of urinary bladder | 1.23e-14 | 1 |
mucosa of urinary bladder | 1.23e-14 | 1 |
uterine cervix | 8.86e-10 | 6 |
neck of organ | 8.86e-10 | 6 |
uterine epithelium | 5.02e-08 | 2 |
cervix epithelium | 5.02e-08 | 2 |
urinary bladder | 5.74e-08 | 2 |
lower urinary tract | 5.74e-08 | 2 |
epithelium of mucosa | 1.70e-07 | 8 |
simple columnar epithelium | 7.64e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.27e-12 | 10 |
cervical cancer | 1.50e-11 | 5 |
squamous cell carcinoma | 3.96e-09 | 14 |