FFCP PHASE1:Hg19::chr12:97872936..97872937,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:97872936..97872937,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr12:97872936..97872937,+ | |||
|id=chr12:97872936..97872937,+ | |||
|ontology_enrichment_celltype=CL:0000064!8.65e-15!3;CL:0005012!8.65e-15!3;CL:0000067!8.65e-15!3;CL:0002304!8.65e-15!3;CL:0000540!2.42e-12!6;CL:0000031!2.42e-12!6;CL:0000404!2.42e-12!6;CL:0000047!2.81e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000064;9.90e-11;3!CL:0000067;9.90e-11;3!CL:0005012;9.90e-11;3!CL:0002304;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.20e-10,3;CL:0000067,1.20e-10,3;CL:0005012,1.20e-10,3;CL:0002304,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.46e-57;2!UBERON:0005754;2.37e-29;1!UBERON:0007123;1.14e-23;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.40e-15!86;UBERON:0007284!1.40e-15!86;UBERON:0006947!3.57e-15!3;UBERON:0004054!3.57e-15!3;UBERON:0001778!8.65e-15!3;UBERON:0001775!8.65e-15!3;UBERON:0002346!1.08e-14!90;UBERON:0007023!3.39e-12!115;UBERON:0005743!5.97e-12!86;UBERON:0005904!1.71e-11!4;UBERON:0000488!3.29e-11!4;UBERON:0001017!3.79e-11!82;UBERON:0003056!5.72e-11!61;UBERON:0000341!1.10e-10!2;UBERON:0003135!1.14e-10!11;UBERON:0000073!1.78e-10!94;UBERON:0001016!1.78e-10!94;UBERON:0001049!7.51e-10!57;UBERON:0005068!7.51e-10!57;UBERON:0006241!7.51e-10!57;UBERON:0007135!7.51e-10!57;UBERON:0002616!1.95e-09!59;UBERON:0004121!2.82e-09!169;UBERON:0000924!6.02e-09!173;UBERON:0006601!6.02e-09!173;UBERON:0000153!6.94e-09!129;UBERON:0007811!6.94e-09!129;UBERON:0000970!1.23e-07!20;UBERON:0002203!1.31e-07!6;UBERON:0001768!1.31e-07!6;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0000033!2.72e-07!123;UBERON:0002104!3.05e-07!21;UBERON:0003978!3.37e-07!3;UBERON:0009751!3.37e-07!3;UBERON:0000946!3.37e-07!3;UBERON:0002523!3.37e-07!3;UBERON:0005983!3.37e-07!3;UBERON:0002165!3.37e-07!3;UBERON:0002062!3.37e-07!3;UBERON:0007280!3.37e-07!3;UBERON:0001950!4.75e-07!20;UBERON:0002791!5.00e-07!33;UBERON:0002780!6.10e-07!41;UBERON:0001890!6.10e-07!41;UBERON:0006240!6.10e-07!41;UBERON:0002020!8.06e-07!34;UBERON:0003528!8.06e-07!34;UBERON:0007625!8.21e-07!11;UBERON:0001893!8.57e-07!34;UBERON:0003080!9.57e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.64e-38;3!UBERON:0004054;2.64e-38;3!UBERON:0000998;2.37e-29;1!UBERON:0001301;2.37e-29;1!UBERON:0006868;2.37e-29;1!UBERON:0005904;4.86e-29;4!UBERON:0002046;1.14e-23;5!UBERON:0000341;1.33e-15;2!UBERON:0000058;2.81e-12;10!UBERON:0003135;2.98e-11;11!UBERON:0001778;9.90e-11;3!UBERON:0001775;9.90e-11;3!UBERON:0000488;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.49e-38,3;UBERON:0004054,1.49e-38,3;UBERON:0001301,1.33e-29,1;UBERON:0000998,1.78e-29,1;UBERON:0006868,1.78e-29,1;UBERON:0005904,3.16e-29,4;UBERON:0002046,1.28e-23,5;UBERON:0004117,1.28e-23,5;UBERON:0007689,1.28e-23,5;UBERON:0007123,1.28e-23,5;UBERON:0003091,1.28e-23,5;UBERON:0000341,1.33e-15,2;UBERON:0000080,1.31e-13,9;UBERON:0002120,1.31e-13,9;UBERON:0004875,1.31e-13,9;UBERON:0005721,1.31e-13,9;UBERON:0005754,1.31e-13,9;UBERON:0007297,1.31e-13,9;UBERON:0003135,2.55e-11,11;UBERON:0009722,2.55e-11,11;UBERON:0004876,2.55e-11,11;UBERON:0007690,2.55e-11,11;UBERON:0001778,1.20e-10,3;UBERON:0001775,1.20e-10,3;UBERON:0003887,1.85e-10,12;UBERON:0000488,2.61e-08,4;UBERON:0008814,2.77e-07,18;UBERON:0000058,6.01e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.221729397462564,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.464965701472501,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0.26721740526556,0,0,0,0,0,0,0.426467963801962,2.14257988317366,0,0,0,1.0820016907288,5.45716410187192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:97872936..97872937,+ | |||
}} |
Latest revision as of 13:58, 24 July 2015
Short description: | p@chr12:97872936..97872937, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97872936..97872937, + |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.20e-10 | 3 |
ciliated epithelial cell | 1.20e-10 | 3 |
multi-ciliated epithelial cell | 1.20e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.49e-38 | 3 |
internal male genitalia | 1.49e-38 | 3 |
epididymis | 1.33e-29 | 1 |
seminal vesicle | 1.78e-29 | 1 |
seminal fluid secreting gland | 1.78e-29 | 1 |
duct of male reproductive system | 3.16e-29 | 4 |
thyroid gland | 1.28e-23 | 5 |
pharyngeal pouch | 1.28e-23 | 5 |
thyroid diverticulum | 1.28e-23 | 5 |
pharyngeal pouch 2 | 1.28e-23 | 5 |
thyroid primordium | 1.28e-23 | 5 |
throat | 1.33e-15 | 2 |
mesonephros | 1.31e-13 | 9 |
pronephros | 1.31e-13 | 9 |
nephrogenic cord | 1.31e-13 | 9 |
pronephric mesoderm | 1.31e-13 | 9 |
rostral part of nephrogenic cord | 1.31e-13 | 9 |
presumptive pronephric mesoderm | 1.31e-13 | 9 |
male reproductive organ | 2.55e-11 | 11 |
entire pharyngeal arch endoderm | 2.55e-11 | 11 |
urogenital ridge | 2.55e-11 | 11 |
early pharyngeal endoderm | 2.55e-11 | 11 |
ciliary epithelium | 1.20e-10 | 3 |
ciliary body | 1.20e-10 | 3 |
intraembryonic coelom | 1.85e-10 | 12 |
atypical epithelium | 2.61e-08 | 4 |
pharyngeal arch system | 2.77e-07 | 18 |
duct | 6.01e-07 | 19 |