FFCP PHASE1:Hg19::chr13:72441506..72441562,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1602 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2663 | |||
|TSSclassifier=strong | |||
|UniProt=D0FY35,D0FY36,A6NJF5,Q9UI36 | |||
|association_with_transcript=-176bp_to_ENST00000305425,ENST00000313174,ENST00000354591,ENST00000377826,NM_004392,NM_080759,NM_080760,uc010thn.1,uc010tho.1,uc010thp.1_5end | |||
|cluster_id=chr13:72441506..72441562,- | |||
|description=CAGE_peak_3_at_DACH1_5end | |||
|id=chr13:72441506..72441562,- | |||
|ontology_enrichment_celltype=CL:0000115!1.27e-09!35;CL:0002139!9.12e-08!24;CL:0002078!3.08e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.30e-09;24!CL:0000115;2.09e-08;36!CL:0000071;6.70e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.02e-09,36;CL:0002139,1.19e-09,24;CL:0000071,6.13e-08,18;CL:0002546,6.13e-08,18;CL:0002078,9.44e-08,45;CL:0002543,7.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.70e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.66e-25!115;UBERON:0000073!1.10e-16!94;UBERON:0001016!1.10e-16!94;UBERON:0005743!1.14e-16!86;UBERON:0003075!5.53e-16!86;UBERON:0007284!5.53e-16!86;UBERON:0001049!1.33e-15!57;UBERON:0005068!1.33e-15!57;UBERON:0006241!1.33e-15!57;UBERON:0007135!1.33e-15!57;UBERON:0001017!3.84e-15!82;UBERON:0002346!7.23e-15!90;UBERON:0002616!3.61e-13!59;UBERON:0000955!5.41e-13!69;UBERON:0006238!5.41e-13!69;UBERON:0003056!1.38e-12!61;UBERON:0003080!8.48e-12!42;UBERON:0002780!2.01e-11!41;UBERON:0001890!2.01e-11!41;UBERON:0006240!2.01e-11!41;UBERON:0004111!1.82e-10!241;UBERON:0000153!7.13e-10!129;UBERON:0007811!7.13e-10!129;UBERON:0004121!1.08e-09!169;UBERON:0000477!2.19e-09!286;UBERON:0000033!2.36e-09!123;UBERON:0000924!3.15e-09!173;UBERON:0006601!3.15e-09!173;UBERON:0002020!5.24e-09!34;UBERON:0003528!5.24e-09!34;UBERON:0001893!8.64e-09!34;UBERON:0000025!1.32e-08!194;UBERON:0002791!1.80e-08!33;UBERON:0001869!2.30e-08!32;UBERON:0000483!2.93e-07!309;UBERON:0000062!4.85e-07!511;UBERON:0000468!5.97e-07!659;UBERON:0000467!6.46e-07!625;UBERON:0000119!6.73e-07!312;UBERON:0000480!8.21e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.88e-08;49!UBERON:0004638;6.70e-08;18!UBERON:0001986;6.70e-08;18!UBERON:0004852;6.70e-08;18!UBERON:0003296;9.43e-08;4!UBERON:0010133;9.43e-08;4!UBERON:0005409;5.16e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.08e-08,25;UBERON:0004638,6.13e-08,18;UBERON:0001986,6.13e-08,18;UBERON:0004852,6.13e-08,18;UBERON:0003296,1.01e-07,4;UBERON:0010133,1.01e-07,4;UBERON:0007023,1.24e-07,114;UBERON:0000160,9.83e-07,17 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,1.10808952269109,0.204000691244253,0.626909442956176,0.85870796139317,1.50561867580173,1.75759695432724,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.880801318004542,0,0,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,2.3633704291017,0.443458794925128,1.58102614247627,1.89919659471683,0,0,0,0,0,0.715471872916026,0.571994910780128,1.11437250398869,1.19257444420023,1.72046919021225,2.08284300964557,2.26123176769604,0.419499436209906,3.30141650328081,1.25396979922086,5.94358546089456,7.1153252537342,12.0499420595281,0.402829317109147,0,0.488124115096339,0,0,4.19708722935175,4.4905874525234,5.63057402416611,0,2.84779697870439,1.64881569537367,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0.454072282934794,0.576175924479999,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.348581828608555,1.0366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90524363699719,2.80483547606892,0.8231480226628,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,2.55046890945169,1.52631302506568,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,34.979089890612,0.088048434013226,0,1.00883967391873,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,2.60279707715243,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0.413536052245775,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,3.4120015221269,0.680374821106063,0.863663664408557,3.08454505380579,0,0.501689773854853,0.509752546090077,0,0,0.219259876645935,0,0.512900250232778,0.328014645699706,1.62689197332152,2.47298427954533,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84991942105343,0,0,0,0,0.318852545457645,0,0,0,0,0.561594356226918,0,0.626719583092093,0,0,0,0.201799707191048,2.12923118845163,2.40453741329035,1.53620382154229,2.68411329470899,1.66849141711908,0.781552381608161,2.78406173895242,3.69262196843137,0.270455678475983,2.99764771198038,0,0,3.36968812325356,0,0,0,0,0,0,0,0.844016498463076,0.445234820091624,0,5.48926061132783,0.996239941255349,1.65770349318689,38.29377767385,0.102268682502155,0,0,0,0,0,1.08507746200627,0,0,0,0.371072392647405,0,1.30213880542617,7.25917999968424,0.724999575434793,0,0.254253650292766,0,8.96332770427808,0,6.42412481253181,4.42870692906919,1.20596438625408,0,0.552896299656123,0,0.438770794307945,0,0,2.07765697960252,0,0,0,0,0,0.274792780205587,0.533034776018635,0,1.2558420511602,0,0,0,0,0.189753732724185,0.476809736941136,0.421996129056054,0,0,7.14082511148901,1.99052386215701,2.0345239835768,2.4441205797345,0,0,0,0.269604531922708,4.01288823649394,0.702793337176017,0,0.19566461893209,0,0.789168805698781,3.62972148145992,0.30607276163049,0.189559738885464,0.300646838828985,1.45163467956146,0,0,0,1.19472429772959,0,1.10939738410511,0.347119476670262,0,0,1.57254001417827,0,0,0,0,0.387956065953678,0,4.74559555639118,0.548167698587004,0,0.253243183823515,0,0.0801588202515337,3.41524791582964,0,0,1.83258553865465,7.72177490378841,0.288109595976299,0,0,0,0,0,0.288950589901519,0.600420288709789,0.958337652243951,0,0,0,0.558564802544508,2.7499250881402,2.87149209830726,0.399358000997982,1.71690419254628,0.223171457441873,6.04651252380536,0,0,0,0,0,0.0984274815147488,0,0,0.817220436669454,0,0.137539436597234,0.415440338029185,0,0,0.364497339948148,0,2.20655980437755,11.6449185659696,0,0,0,0.714695326373367,2.64836788146173,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0.517131825446202,1.05786081394152,0,0,6.40724475406168,32.5412911556309,4.14239055347196,0,0,0,0,1.08803560673895,1.2534494701135,0.612691153526923,0.655745261419609,4.71162288750703,0.886068179966986,0.244052529803926,0.625954653532499,0.573409195690071,0.776503360757966,0.745156835296601,2.62862406378839,0.874862855734746,0,0,0,23.4167452903441,15.9413131471908,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.363697318405119,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0.76872455576384,0.345430341731199,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62735233736067,3.77386839888386,0,2.07498312564826,0,0,0,0,0,0,2.40171224485641,0,0.3062454773532,0.578063025868136,0,0.798169295285756,0.205116364240755,0,0.414943514785307,0.968853873791107,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0.607838261565552,0,0.620060389503552,0.570742291745161,1.09394961803644,3.83780436800028,0.496211178389294,0.175871244359621,0,16.6067569122269,36.6549257218518,2.42786241694653,8.65116327134931,2.21755925406597,0,0.171488009437418,0.679697329768317,0.394636641377094,0,0.111231401892069,2.43328587836593,0.471346769748006,0.840816489941367,3.65263488203798,0.431855182437243,0,2.57315559035963,6.47855808104179,1.27865567904938,9.38834670433929,0,0.207216164163037,0.6828739083758,0.691259661814092,1.72090943528111,0,0,2.54032230114557,0.22910686854405,0,0,0,0,0.243835849964539,0,1.53994210284371,8.11870101936739,4.37139893753226,2.80727356154527,18.7013728651686,0.713520544665411,1.1294608203896,16.6010180285598,0,2.46957305945423,3.49695296806332,0.940634592723046,0.490296643507811,5.18488403623577,1.17785080268967,2.0793248022896,1.2679671827502,0,1.12780701575824,6.25241513343699,0,0.178553938605658,0,0,4.3820183294791,0,0.430018749454354,2.20880187070458,0.475940431336403,2.61810414204226,3.7031878836078,0,0,0,1.00933139868063,0,0,0,1.3360870263278,0,0,0.303114792872958,0.267964130156178,0,0.310298987585686,0.639701945702943,2.61870874610114,0.0645889098360061,0.620747142958579,0.112131862580613,0.190941474834495,1.0105859447911,1.08858373948481,4.10679961302337,0,0.502055437748735,0.665320713092027,0,0,0,0,0,3.30051899293739,3.66206560484165,3.99454064511308,0.603821380773079,0 | |||
|short_description=p3@DACH1 | |||
}} |
Latest revision as of 22:03, 17 September 2015
Short description: | p3@DACH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DACH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -176bp_to_ENST00000305425, ENST00000313174, ENST00000354591, ENST00000377826, NM_004392, NM_080759, NM_080760, uc010thn.1, uc010tho.1, uc010thp.1_5end |
EntrezGene: | DACH1 |
HGNC: | 2663 |
UniProt: | D0FY35D0FY36A6NJF5Q9UI36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.02e-09 | 36 |
endothelial cell of vascular tree | 1.19e-09 | 24 |
blood vessel endothelial cell | 6.13e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.13e-08 | 18 |
meso-epithelial cell | 9.44e-08 | 45 |
vein endothelial cell | 7.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.08e-08 | 25 |
blood vessel endothelium | 6.13e-08 | 18 |
endothelium | 6.13e-08 | 18 |
cardiovascular system endothelium | 6.13e-08 | 18 |
gland of diencephalon | 1.01e-07 | 4 |
neuroendocrine gland | 1.01e-07 | 4 |
adult organism | 1.24e-07 | 114 |
intestine | 9.83e-07 | 17 |