FFCP PHASE1:Hg19::chr14:106237005..106237028,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:106237005..106237028,+ | |||
|coexpression_cluster_id=C649 | |||
|description=CAGE_peak_at_chr14:106237005..106237028,+ | |||
|id=chr14:106237005..106237028,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.26e-08;7 | |||
|ontology_enrichment_disease=DOID:12603!2.66e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-25!115;UBERON:0002106!1.54e-09!3;UBERON:0004854!1.54e-09!3;UBERON:0009034!1.54e-09!3;UBERON:0002095!1.54e-09!3;UBERON:0004782!1.54e-09!3;UBERON:0003281!1.54e-09!3;UBERON:0009664!1.54e-09!3;UBERON:0002296!1.54e-09!3;UBERON:0005602!1.54e-09!3;UBERON:0001179!1.54e-09!3;UBERON:0006293!1.54e-09!3;UBERON:0004177!1.24e-08!7;UBERON:0002372!6.59e-08!1;UBERON:0001961!6.59e-08!1;UBERON:0001744!6.59e-08!1;UBERON:0001735!6.59e-08!1;UBERON:0000029!7.03e-08!1;UBERON:0000998!9.10e-08!1;UBERON:0006868!9.10e-08!1;UBERON:0002171!9.71e-08!1;UBERON:0006518!9.71e-08!1;UBERON:0008949!9.71e-08!1;UBERON:0000101!9.71e-08!1;UBERON:0002167!9.71e-08!1;UBERON:0002363!4.61e-07!1;UBERON:0007647!4.61e-07!1;UBERON:0010115!4.61e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.46e-50;1!UBERON:0001961;1.46e-50;1!UBERON:0001744;1.46e-50;1!UBERON:0001042;1.46e-50;1!UBERON:0001735;1.46e-50;1!UBERON:0000029;2.42e-50;1!UBERON:0006562;4.32e-26;2!UBERON:0003127;8.10e-26;2!UBERON:0002465;6.99e-21;10!UBERON:0002106;1.03e-17;3!UBERON:0002405;2.15e-17;27!UBERON:0004177;3.42e-11;5!UBERON:0005057;3.42e-11;5!UBERON:0002193;2.03e-10;42!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.46e-50,1;UBERON:0001961,1.46e-50,1;UBERON:0001744,1.46e-50,1;UBERON:0001735,1.46e-50,1;UBERON:0000029,2.42e-50,1;UBERON:0003127,9.18e-26,2;UBERON:0002465,6.99e-21,10;UBERON:0002106,9.46e-18,3;UBERON:0004854,9.46e-18,3;UBERON:0009034,9.46e-18,3;UBERON:0002095,9.46e-18,3;UBERON:0004782,9.46e-18,3;UBERON:0003281,9.46e-18,3;UBERON:0009664,9.46e-18,3;UBERON:0002296,9.46e-18,3;UBERON:0005602,9.46e-18,3;UBERON:0001179,9.46e-18,3;UBERON:0006293,9.46e-18,3;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.533937062838473,0,0.828478110694391,3.96932817449561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751871343838829,0,1.19929387109915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0,0.193766729508018,0,0,0,0,0.217716747896961,0,5.52286834719618,1.00411087549747,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr14:106237005..106237028,+ | |||
}} |
Latest revision as of 18:39, 24 July 2015
Short description: | p@chr14:106237005..106237028, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106237005..106237028, + |
Coexpression cluster: | C649_tonsil_esophagus_tongue_throat_trachea_cervical_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 1.46e-50 | 1 |
mucosa-associated lymphoid tissue | 1.46e-50 | 1 |
lymphoid tissue | 1.46e-50 | 1 |
tonsillar ring | 1.46e-50 | 1 |
lymph node | 2.42e-50 | 1 |
open tracheal system trachea | 9.18e-26 | 2 |
lymphoid system | 6.99e-21 | 10 |
spleen | 9.46e-18 | 3 |
gastrointestinal system mesentery | 9.46e-18 | 3 |
stomach region | 9.46e-18 | 3 |
mesentery | 9.46e-18 | 3 |
gastrointestinal system serosa | 9.46e-18 | 3 |
mesentery of stomach | 9.46e-18 | 3 |
gut mesentery | 9.46e-18 | 3 |
dorsal mesentery | 9.46e-18 | 3 |
dorsal mesogastrium | 9.46e-18 | 3 |
peritoneal cavity | 9.46e-18 | 3 |
spleen primordium | 9.46e-18 | 3 |
hemopoietic organ | 2.18e-08 | 7 |
immune organ | 2.18e-08 | 7 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
stomach | 1.69e-07 | 8 |
food storage organ | 1.69e-07 | 8 |