FFCP PHASE1:Hg19::chr14:61789391..61789413,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |||
|TSSclassifier=strong | |||
|UniProt=B4DJN5 | |||
|association_with_transcript=9bp_to_ENST00000555082_5end | |||
|cluster_id=chr14:61789391..61789413,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_8_at_PRKCH_5end | |||
|id=chr14:61789391..61789413,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.13e-21!18;CL:0000789!5.13e-21!18;CL:0002420!5.13e-21!18;CL:0002419!5.13e-21!18;CL:0000790!5.13e-21!18;CL:0000084!2.34e-17!25;CL:0000827!2.34e-17!25;CL:0000625!1.15e-13!11;CL:0000838!2.33e-11!52;CL:0000542!5.80e-11!53;CL:0000051!5.80e-11!53;CL:0000624!1.36e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.19e-58;18!CL:0000789;9.19e-58;18!CL:0002419;9.19e-58;18!CL:0000084;2.32e-40;25!CL:0000625;2.50e-39;11!CL:0000624;1.34e-23;6!CL:0000898;4.97e-13;3!CL:0000542;1.98e-11;53!CL:0000815;2.71e-09;2!CL:0000792;2.71e-09;2!CL:0002677;2.71e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.84e-58,18;CL:0000789,4.84e-58,18;CL:0002420,4.84e-58,18;CL:0002419,4.84e-58,18;CL:0000790,4.84e-58,18;CL:0000084,1.48e-40,25;CL:0000827,1.48e-40,25;CL:0000625,1.32e-39,11;CL:0000624,1.30e-23,6;CL:0000838,8.78e-22,52;CL:0000542,2.79e-21,53;CL:0000051,2.79e-21,53;CL:0000898,4.90e-13,3;CL:0000815,2.83e-09,2;CL:0000792,2.83e-09,2;CL:0002677,2.83e-09,2;CL:0002087,3.35e-08,115;CL:0002031,8.62e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;9.19e-58;18!CL:0000051;1.98e-11;53 | |||
|ontology_enrichment_disease=DOID:1749!7.01e-11!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000974!1.33e-07!10;UBERON:0004119!4.32e-07!169;UBERON:0000925!4.32e-07!169;UBERON:0006595!4.32e-07!169;UBERON:0004177!8.47e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.89e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.19e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.492603536699674,0.393553906568396,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.540775862049,3.14408610199332,2.46721798799411,3.34372990781356,5.21475626613745,3.78758244587787,7.79306913631645,1.00269411196656,5.00830042707223,1.99380505125259,2.70803863765016,1.0247305578054,0.780356085359269,1.80881695064044,1.10540007114339,2.02862160014537,2.37258501059297,2.67540828089713,3.1360657141493,2.15287751125376,4.98186641682498,5.49803912772208,3.28925599625354,1.27426165729639,3.25541726928209,3.8018081777935,3.01150238155546,3.32765189001488,2.49861453104692,1.89421801635213,4.10563998460523,3.02410114837099,1.87208137048455,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0.476981248610684,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,1.1240175325762,0.402115889646523,0.370353780634118,0,0,0,0,0,0.577465791044295,0,0.190254152234598,0,1.71697232418975,0,0,0,0,0.335964256397719,0.283550194484773,0.985143749731331,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.77327684181734,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,2.29391162142713,0,1.66762242820452,2.46817363851717,0,1.08006287447623,0.79312517629427,0,0,0.245040215981032,0,0,0.142283686696828,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0.593929361665277,0.614321404198464,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0.251932747854276,0,0.492339221844278,0,0.898683511473268,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0,0,0.682760689712998,0.508507300585533,0,0,0,0,0,0,0,0,0,0,1.85195387982283,0.41827123283581,0.0769502585037971,0,0,0.807818799687949,0.54323685961004,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0.782658475728359,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0.783939179315021,0.69647365264322,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.240476460754601,1.28071796843612,0.19980960958213,1.44090417154106,0,0,1.58460277786965,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0.828478110694391,0,0,0.365377795142688,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.785181748008205,0.825788063434183,1.28400018965175,0.346576998451015,0,0,0,0.0752103283492573,0,0.781514011233092,1.04762677792569,0.327543835020193,0.443568258651136,0,0,0,0.0634158101939068,0,0,0,0,0.894336993477167,0,0,4.85572483389305,3.64259506162076,0.0887023701626388,0,0,0,0.0657727735628491,0.118193840883968,0.444925607568277,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.17071847709395,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0.308696632431779,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0.469919589899268,0.0644578879735772,4.4973520166218,0.535661815816973,2.11736923029415,0.240724100067505,0.730336388246517,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0.426467963801962,0,0.387533459016037,0.496597714366863,0,0.572824424503484,0.404234377916439,0,0,0.7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| |||
|short_description=p8@PRKCH | |||
}} |
Latest revision as of 21:46, 24 September 2015
Short description: | p8@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRKCH_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 9bp_to_ENST00000555082_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | B4DJN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.84e-58 | 18 |
alpha-beta T cell | 4.84e-58 | 18 |
immature T cell | 4.84e-58 | 18 |
mature T cell | 4.84e-58 | 18 |
immature alpha-beta T cell | 4.84e-58 | 18 |
T cell | 1.48e-40 | 25 |
pro-T cell | 1.48e-40 | 25 |
CD8-positive, alpha-beta T cell | 1.32e-39 | 11 |
CD4-positive, alpha-beta T cell | 1.30e-23 | 6 |
lymphoid lineage restricted progenitor cell | 8.78e-22 | 52 |
lymphocyte | 2.79e-21 | 53 |
common lymphoid progenitor | 2.79e-21 | 53 |
naive T cell | 4.90e-13 | 3 |
regulatory T cell | 2.83e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.83e-09 | 2 |
naive regulatory T cell | 2.83e-09 | 2 |
nongranular leukocyte | 3.35e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.62e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.19e-09 | 2 |