FFCP PHASE1:Hg19::chr15:45689441..45689452,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2628 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4175 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000560538_5end | |||
|cluster_id=chr15:45689441..45689452,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_12_at_GATM_5end | |||
|id=chr15:45689441..45689452,- | |||
|ontology_enrichment_celltype=CL:0000181!1.85e-07!12;CL:0000417!1.85e-07!12;CL:0000668!1.85e-07!12;CL:0000414!1.85e-07!12;CL:0000412!1.85e-07!12;CL:0000182!1.85e-07!12 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.46e-25!27;UBERON:0005409!6.76e-20!35;UBERON:0002108!9.83e-13!14;UBERON:0001155!7.74e-10!9;UBERON:0004921!2.00e-09!129;UBERON:0004185!2.00e-09!129;UBERON:0000059!3.25e-08!11;UBERON:0001007!8.89e-08!155;UBERON:0001555!8.89e-08!155;UBERON:0007026!8.89e-08!155;UBERON:0004119!4.27e-07!169;UBERON:0000925!4.27e-07!169;UBERON:0006595!4.27e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;9.01e-60;4!UBERON:0000160;5.77e-46;17!UBERON:0005409;3.88e-36;22!UBERON:0004921;4.77e-22;33!UBERON:0001155;1.26e-15;9!UBERON:0000059;5.58e-13;11!UBERON:0002114;2.74e-12;2!UBERON:0001555;2.89e-10;54!UBERON:0000922;6.03e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.37e-60,4;UBERON:0000160,5.51e-46,17;UBERON:0005409,4.59e-32,25;UBERON:0001155,1.31e-15,9;UBERON:0000059,5.76e-13,11;UBERON:0002114,2.59e-12,2;UBERON:0004921,2.22e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18447232212021,1.22206028986725,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79785402430569,3.71551252856727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@GATM | |||
}} |
Latest revision as of 20:02, 17 September 2015
Short description: | p12@GATM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GATM_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 4bp_to_ENST00000560538_5end |
EntrezGene: | GATM |
HGNC: | 4175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 7.37e-60 | 4 |
intestine | 5.51e-46 | 17 |
gastrointestinal system | 4.59e-32 | 25 |
colon | 1.31e-15 | 9 |
large intestine | 5.76e-13 | 11 |
duodenum | 2.59e-12 | 2 |
subdivision of digestive tract | 2.22e-07 | 118 |