FFCP PHASE1:Hg19::chr17:19651955..19651957,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=405 | |||
|TSSclassifier=strong | |||
|UniProt=P30838,E7ERM4,Q6PKA6 | |||
|association_with_transcript=-209bp_to_ENST00000225740,ENST00000379258,ENST00000457844,NM_000691,uc002gwj.2,uc002gwk.2,uc010cqv.2_5end | |||
|cluster_id=chr17:19651955..19651957,- | |||
|description=CAGE_peak_7_at_ALDH3A1_5end | |||
|id=chr17:19651955..19651957,- | |||
|ontology_enrichment_celltype=CL:0002393!1.80e-07!9;CL:0002397!1.80e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000767;6.01e-16;3!CL:0002541;1.22e-15;3!CL:0000097;6.08e-10;5!CL:0002393;1.50e-08;6!CL:0002397;1.50e-08;6!CL:0000766;2.45e-07;69!CL:0002602;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,4.63e-16,3;CL:0002541,1.14e-15,3;CL:0002393,8.77e-12,9;CL:0002397,8.77e-12,9;CL:0000766,2.50e-11,72;CL:0000738,4.89e-10,136;CL:0000097,4.98e-10,5;CL:0002028,4.98e-10,5;CL:0002032,3.23e-08,161;CL:0000837,3.23e-08,161;CL:0002031,7.23e-08,120;CL:0000037,8.39e-08,168;CL:0000839,1.51e-07,66;CL:0000557,2.00e-07,67;CL:0000988,2.56e-07,177;CL:0000763,3.33e-07,108;CL:0000049,3.33e-07,108;CL:0002602,9.02e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.22e-15;3!UBERON:0000920;1.22e-15;3!UBERON:0005631;1.69e-10;10!UBERON:0000158;1.69e-10;10!UBERON:0006444;8.28e-07;2!UBERON:0001995;8.28e-07;2!UBERON:0004715;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.14e-15,3;UBERON:0005631,1.28e-07,14;UBERON:0000158,1.28e-07,14;UBERON:0003124,3.14e-07,7;UBERON:0004765,5.93e-07,90;UBERON:0006444,9.02e-07,2;UBERON:0001995,9.02e-07,2;UBERON:0004715,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,1.32558950291166,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,1.57345710739562,0,3.56077083626975,0,0,0.369754010166788,0,0,0,0,0.401088894940283,3.25516306073778,0,0,0,0,0,0,0,0,0.619412741790207,0.863077176966451,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0.612167784741805,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,2.09658645508376,0.561643155732475,1.95229960693958,0.803627933485401,0,0.39783335439818,1.0959849225878,0,0,0,0,0,0,0,0,0,0,1.52909291250092,0,0,0.263384084775077,0.786839080455332,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,1.01207876807801,0,0,0,0,0,0,0,0,0.80642697289893,0,1.15859523106239,0,0,0.255725123687061,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,1.42003837006646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,0.576479813667846,3.02981840223312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.862510299438069,1.79680250791648,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.19372242368845,0,0.921482106297696,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0,0,0,0.108647371922008,1.27600463892768,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.0882561266915003,0.451961481561065,0,0,0,0,0,0.85381197895741,0,0,0.114536596165916,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0.77380195455795,0,0.670869375198532,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0.575745591958336,0,0,0,0,0,0,0,0,0,0.339936274560377,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0,0,0.592834895693833,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0.568209015825267,0,0.889811221596536,0.457680136793847,0,0.466311601748341,0.147855149989634,0,0,0,0,0,0.521745061811734,0.300515217994437,0,0,0.181848659202559,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0.558644917973244,0.318004350653419,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0.236387681767936,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0.116241425368125,0.347716544605159,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0.356760272332706,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0,0.297046400327086,0.4226557275834,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0.435433495793923,0,0,0,0.332660356546013,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p7@ALDH3A1 | |||
}} |
Latest revision as of 00:44, 19 September 2015
Short description: | p7@ALDH3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ALDH3A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -209bp_to_ENST00000225740, ENST00000379258, ENST00000457844, NM_000691, uc002gwj.2, uc002gwk.2, uc010cqv.2_5end |
EntrezGene: | ALDH3A1 |
HGNC: | 405 |
UniProt: | P30838E7ERM4Q6PKA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 4.63e-16 | 3 |
chorionic membrane mesenchymal stem cell | 1.14e-15 | 3 |
intermediate monocyte | 8.77e-12 | 9 |
CD14-positive, CD16-positive monocyte | 8.77e-12 | 9 |
myeloid leukocyte | 2.50e-11 | 72 |
leukocyte | 4.89e-10 | 136 |
mast cell | 4.98e-10 | 5 |
basophil mast progenitor cell | 4.98e-10 | 5 |
hematopoietic oligopotent progenitor cell | 3.23e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.23e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 7.23e-08 | 120 |
hematopoietic stem cell | 8.39e-08 | 168 |
myeloid lineage restricted progenitor cell | 1.51e-07 | 66 |
granulocyte monocyte progenitor cell | 2.00e-07 | 67 |
hematopoietic cell | 2.56e-07 | 177 |
myeloid cell | 3.33e-07 | 108 |
common myeloid progenitor | 3.33e-07 | 108 |
annulus pulposus cell | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.14e-15 | 3 |
extraembryonic membrane | 1.28e-07 | 14 |
membranous layer | 1.28e-07 | 14 |
chorion | 3.14e-07 | 7 |
skeletal element | 5.93e-07 | 90 |
annulus fibrosus | 9.02e-07 | 2 |
fibrocartilage | 9.02e-07 | 2 |
annulus fibrosus disci intervertebralis | 9.02e-07 | 2 |