FFCP PHASE1:Hg19::chr17:48262059..48262105,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:48262059..48262105,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48262059..48262105,- | |||
|id=chr17:48262059..48262105,- | |||
|ontology_enrichment_celltype=CL:0000055!9.43e-37!180;CL:0000057!1.49e-20!75;CL:0000183!3.97e-17!59;CL:0000680!7.81e-17!57;CL:0000056!7.81e-17!57;CL:0000355!7.81e-17!57;CL:0000187!3.81e-16!54;CL:0000393!4.20e-14!60;CL:0000211!4.20e-14!60;CL:0000192!2.67e-12!42;CL:0000514!2.67e-12!42;CL:0000048!6.05e-11!430;CL:0000723!2.53e-10!436;CL:0000034!3.17e-09!444;CL:0002371!1.51e-08!591;CL:0000144!4.84e-08!625;CL:0000359!8.48e-08!32;CL:0000222!5.35e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.67e-10;55!CL:0000048;4.14e-09;58!CL:0000192;9.47e-09;43!CL:0000723;1.48e-08;61!CL:0000187;1.64e-08;55!CL:0000349;2.14e-07;19!CL:0000057;2.15e-07;73!CL:0002334;2.53e-07;12!CL:0002320;3.00e-07;188!CL:0002569;8.12e-07;6!CL:0000034;8.61e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.21e-16,76;CL:0000048,2.00e-13,427;CL:0000187,2.77e-13,55;CL:0000680,6.00e-13,58;CL:0000056,6.00e-13,58;CL:0000355,6.00e-13,58;CL:0000723,1.05e-12,433;CL:0000192,4.48e-12,43;CL:0000514,4.48e-12,43;CL:0000034,8.66e-12,441;CL:0000393,6.44e-11,61;CL:0000211,6.44e-11,61;CL:0000349,2.20e-07,19;CL:0002334,2.28e-07,12;CL:0002569,7.10e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;9.47e-09;43!CL:0000355;1.46e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.36e-17!63;UBERON:0001015!1.36e-17!63;UBERON:0000383!1.36e-17!63;UBERON:0000914!1.48e-17!83;UBERON:0002329!1.48e-17!83;UBERON:0003077!1.48e-17!83;UBERON:0003059!1.48e-17!83;UBERON:0007282!1.48e-17!83;UBERON:0009618!1.48e-17!83;UBERON:0007285!1.48e-17!83;UBERON:0001134!1.60e-17!61;UBERON:0002036!1.60e-17!61;UBERON:0003082!1.60e-17!61;UBERON:0004290!7.97e-16!70;UBERON:0000486!2.22e-12!82;UBERON:0005256!1.64e-11!143;UBERON:0002100!2.55e-08!216;UBERON:0000475!2.78e-07!365;UBERON:0000478!4.86e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;7.53e-08;7!UBERON:0009142;7.53e-08;7!UBERON:0002384;3.43e-07;198!UBERON:0003688;4.89e-07;6!UBERON:0002358;4.89e-07;6!UBERON:0003684;4.89e-07;6!UBERON:0001178;4.89e-07;6!UBERON:0006876;6.08e-07;11!UBERON:0003422;8.12e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.47e-13,62;UBERON:0002036,1.47e-13,62;UBERON:0003082,1.47e-13,62;UBERON:0002385,9.18e-13,64;UBERON:0001015,9.18e-13,64;UBERON:0000383,9.18e-13,64;UBERON:0007524,2.04e-11,73;UBERON:0002329,4.30e-11,71;UBERON:0003059,4.30e-11,71;UBERON:0007282,4.30e-11,71;UBERON:0004290,4.30e-11,71;UBERON:0009618,4.30e-11,71;UBERON:0003077,8.86e-11,72;UBERON:0007285,8.86e-11,72;UBERON:0007503,2.78e-10,78;UBERON:0000486,6.61e-08,83;UBERON:0002384,2.87e-07,371;UBERON:0003104,3.68e-07,160;UBERON:0009142,3.68e-07,160;UBERON:0006876,5.76e-07,11;UBERON:0003688,6.31e-07,6;UBERON:0002358,6.31e-07,6;UBERON:0003684,6.31e-07,6;UBERON:0001178,6.31e-07,6;UBERON:0005256,6.48e-07,122;UBERON:0003422,7.10e-07,6 | |||
|phase1_expression=8.17552706717505,2.99740733447376,6.3429481843187,4.00293193412522,4.02264984984559,7.85104671690332,2.53299878168311,0,0.261185628199839,0,0,2.40285509343189,2.37390280405608,0.990130823680373,1.65698687863958,0,1.20538905604795,1.46062018077475,0.487932798790507,1.72369481307503,4.08001382488506,1.25381888591235,0.286235987131057,0.136874425072884,1.12988375635323,0.0764134057479513,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,3.45228916977532,2.53007406669196,9.5254203020819,2.02785126545153,2.3858578411533,5.35298357332899,1.41802225746102,2.21729397462564,1.75669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.2971207635863,1.64619665163954,0.794455084879313,4.87622255272983,1.77334191099179,1.68203280042692,13.8773694448616,6.66002380726332,0,1.34710672069688,0.490385709340376,4.99479511228274,23.62321290368,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,15.4440371446667,11.1270118175351,0.910161361938026,7.90479955997862,1.0100166837244,0.375355559615893,0.831192346452549,13.608306247306,9.19463387397059,15.6247581262861,2.83580457900053,2.15267562826634,6.40672166455702,5.51022943014861,2.10063767259082,3.40073346486848,0.772921620136887,3.16398655763703,4.72573730275545,1.75386609290158,0.504867548488229,5.43094401989566,1.77810662500693,2.13005755509969,0.806016785821122,1.18692414617341,0,0.272746120590835,0,0,0,0,0,0,0,0,1.92972281457866,0,3.25057549622385,3.60939740834793,0,0,0,0,0,0,0,0,0,0,4.20725321410337,22.2249966118956,22.0513067078313,0,0,0,0,0,1.02940686179115,0,0,0,0,0.325808305310325,0,0,0,16.6720345814867,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0,0,1.12131084345361,3.92364061949952,1.68678057388185,9.69537868183333,3.57656445851882,0,2.6593811658487,2.08014873822732,1.80045161983499,1.41849132023278,1.3321108950805,5.14720777169331,30.9294315073123,5.76268235746538,2.93162565864362,4.97548728239564,1.58390374586686,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,7.18874566474748,6.89171615004683,2.85273810081437,2.60606352001643,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.981531933753119,0.500170521059677,1.62759014219841,21.8369404607347,13.20374517099,8.67363282686641,15.11124253406,9.63027519128701,0,5.17365356462525,2.65690239414175,3.87175253937577,0.521301686808497,3.32861967686659,8.5785855952714,0,0,0,0.303127571446259,1.66435439510497,2.41912234663744,8.93188108147597,7.05925077125087,10.6650835884568,13.4546106718486,4.09365799253363,19.3024705372329,4.45254199334973,0.771048469013278,1.9531789784444,1.39616165223476,0,1.39452454151951,0,0,0,2.87036120411517,0.910455840033585,1.44236856455367,0,0,1.56869953835371,1.46139224653261,0,0,0,1.51141141271498,0,1.35473218771926,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.366277859273374,0.82509499920588,0,0,1.6068392984416,0.48335359146061,0.770243085573222,0.614014698904518,0.551346289938122,1.93356440762893,1.30515024522806,1.02271952899321,5.78708231703793,0,0.192190067365106,0,0.10115778085555,1.39453664789186,3.46293581513704,1.3940745403212,0,2.66153015158511,0.869932992075073,1.66791797193528,1.14499909393593,2.60510858551767,4.11293252134344,6.29079639948622,6.14154699147201,14.5499255931533,0.636406495851874,1.56989728039846,6.47540847299933,2.74537029736055,4.00562167975334,2.83055474202642,0,0.842516912477962,7.31450608634386,0.487426979262569,0,1.09199929126389,4.10075752665767,1.13008116620243,4.41092274836899,1.32687795048244,0,2.89387767133344,5.9030527684197,1.62328301570163,0.92947049429925,2.25356482025793,2.58140433967293,3.63521451748548,2.1400263088875,0.354761064070598,0.633322905892992,0.987884678879706,0.75894634753143,1.74967360122491,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,2.37571744666111,0,0,0,0,0,0,0,0,0,0.102268682502155,0,6.53183134089796,0,0,0,0.197286811273867,0,3.33410970433911,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,4.69396576873162,0,0,0,0,0.31900115973192,5.12946523050429,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,3.05515072466813,0,0,0,0,11.236087062183,0,0,0,0,0,4.83962864194656,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0.193978032976839,0,6.77942222341597,0,0,0,0,0.320635281006135,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0,0,0.577901179803038,0,0.136905378891993,0,7.7357779455592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| |||
|short_description=p@chr17:48262059..48262105,- | |||
}} |
Latest revision as of 18:29, 25 July 2015
Short description: | p@chr17:48262059..48262105, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48262059..48262105, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.21e-16 | 76 |
multi fate stem cell | 2.00e-13 | 427 |
muscle cell | 2.77e-13 | 55 |
muscle precursor cell | 6.00e-13 | 58 |
myoblast | 6.00e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.00e-13 | 58 |
somatic stem cell | 1.05e-12 | 433 |
smooth muscle cell | 4.48e-12 | 43 |
smooth muscle myoblast | 4.48e-12 | 43 |
stem cell | 8.66e-12 | 441 |
electrically responsive cell | 6.44e-11 | 61 |
electrically active cell | 6.44e-11 | 61 |
extraembryonic cell | 2.20e-07 | 19 |
preadipocyte | 2.28e-07 | 12 |
mesenchymal stem cell of umbilical cord | 7.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.47e-13 | 62 |
striated muscle tissue | 1.47e-13 | 62 |
myotome | 1.47e-13 | 62 |
muscle tissue | 9.18e-13 | 64 |
musculature | 9.18e-13 | 64 |
musculature of body | 9.18e-13 | 64 |
dense mesenchyme tissue | 2.04e-11 | 73 |
somite | 4.30e-11 | 71 |
presomitic mesoderm | 4.30e-11 | 71 |
presumptive segmental plate | 4.30e-11 | 71 |
dermomyotome | 4.30e-11 | 71 |
trunk paraxial mesoderm | 4.30e-11 | 71 |
paraxial mesoderm | 8.86e-11 | 72 |
presumptive paraxial mesoderm | 8.86e-11 | 72 |
epithelial vesicle | 2.78e-10 | 78 |
multilaminar epithelium | 6.61e-08 | 83 |
connective tissue | 2.87e-07 | 371 |
mesenchyme | 3.68e-07 | 160 |
entire embryonic mesenchyme | 3.68e-07 | 160 |
vasculature of organ | 5.76e-07 | 11 |
omentum | 6.31e-07 | 6 |
peritoneum | 6.31e-07 | 6 |
abdominal cavity | 6.31e-07 | 6 |
visceral peritoneum | 6.31e-07 | 6 |
trunk mesenchyme | 6.48e-07 | 122 |
mesenchyme of umbilical cord | 7.10e-07 | 6 |