FFCP PHASE1:Hg19::chr19:44008891..44008914,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=653583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30499 | |||
|TSSclassifier=strong | |||
|UniProt=Q6NSJ2,Q96HZ0 | |||
|association_with_transcript=70bp_to_NM_198850,uc002own.3,uc002owo.2_5end | |||
|cluster_id=chr19:44008891..44008914,- | |||
|description=CAGE_peak_1_at_PHLDB3_5end | |||
|id=chr19:44008891..44008914,- | |||
|ontology_enrichment_celltype=CL:0000791!6.78e-08!18;CL:0000789!6.78e-08!18;CL:0002420!6.78e-08!18;CL:0002419!6.78e-08!18;CL:0000790!6.78e-08!18;CL:0000066!1.18e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.37e-09;18!CL:0000789;5.37e-09;18!CL:0002419;5.37e-09;18!CL:0000084;1.24e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.52e-09,18;CL:0000789,2.52e-09,18;CL:0002420,2.52e-09,18;CL:0002419,2.52e-09,18;CL:0000790,2.52e-09,18;CL:0000084,8.37e-08,25;CL:0000827,8.37e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;5.37e-09;18 | |||
|ontology_enrichment_disease=DOID:305!5.67e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.79e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000077!4.55e-08!130;UBERON:0004119!6.70e-08!169;UBERON:0000925!6.70e-08!169;UBERON:0006595!6.70e-08!169;UBERON:0004921!3.69e-07!129;UBERON:0004185!3.69e-07!129;UBERON:0001007!4.05e-07!155;UBERON:0001555!4.05e-07!155;UBERON:0007026!4.05e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,7.57e-08,118 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0.410623275218653,0.376627918784408,0.229240217243854,0.0821005894499457,0.314843125254717,0.786728553697808,0.767658796194425,0,3.67768489791571,0.90361775633475,1.10926203050036,0,0,0.587200878669695,0,0.401088894940283,0.651032612147555,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0.853460445133014,0.400395987036012,0.574752439954483,0,0,0,1.17447437874188,0,1.32171328579026,3.92355994087075,0.526768169550154,2.360517241366,3.14408610199332,3.70082698199117,2.50779743086017,6.19252306603822,2.36723902867367,3.89653456815823,0.891283655081389,1.76763544484902,1.55073726208535,1.89562704635511,0.768547918354051,0.910415432919148,0.822189523018381,0.829050053357545,3.76744011455568,5.33831627383417,3.74557159325598,1.04535523804977,0.453237370790265,0.766440987203842,2.74901956386104,4.04831507231205,2.86708872891687,3.90650072313851,0.950452044448374,1.35517607169996,1.4078527226986,0,1.65744076430812,0.821127996921047,2.82249440514625,1.33720097891754,2.31719046212478,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0,0.351339142772504,0.851363990735132,2.18577172975525,2.59549109949101,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0.74291500265913,0,0.860234595106124,0.347140501607594,1.69592382577203,0,0.275118041940067,0.208994966536811,0,0,1.33888245105868,0.805658634218294,0.760272105718513,1.70843440283719,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,1.89853131913626,0,0,0,1.74437620857014,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.673344455816265,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0.412210116953756,0,0.18611685633159,0,0,0,0.276149695926898,0,0,0,0.339121184620975,0.966304265816484,0.545492241181669,0,0.365921118388786,0.265059536642971,0.348581828608555,1.45125477021519,0.252320850875628,1.09493207722749,0,0.643240938192885,0,0,0,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0,2.20731549707325,3.07471096357784,0.171567810298526,0.109750285408626,0,0.402115889646523,0.462942225792648,1.3032332212413,0,0,0.231860809950154,0.234817388471643,0.577465791044295,0.462985512576611,1.14152491340759,7.90204397959275,8.58486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0.492663237895943,0.264145302039678,0.829312462163088,1.15295962733569,1.76739406796932,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,2.85273810081437,0,0.205476322550383,0,0.448340575974109,1.77327684181734,1.50939302401662,2.56686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,2.06768026122887,3.01999881146064,2.45473382947922,1.81876542867756,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,3.62578348774867,0,0.644566922551274,0.114814448164607,0.364182336013434,0,3.15839729035188,0.385076685522074,3.13739907670742,1.46139224653261,0.422206515571503,0,0.170093705276516,0.647747748306418,1.54227252690289,0.812839312631559,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,1.96808787419823,0.976135183992909,0.309123034943167,0.0915694648183434,0.41254749960294,0,1.30012049207304,0,0,0,0,0,0.214840489736547,0,0.255679882248303,0.178064071293475,0.165284915360978,0.384380134730212,0.638063562472921,0.2023155617111,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,5.76459199597678,0.229723400206959,1.01489521846434,1.52927441428475,0,0.952927101831156,0.411362273086194,0,0,0.79312517629427,1.06824071127473,3.84991942105343,0.735120647943095,0.371606350251437,0,2.84567373393656,0.159426272728822,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.18714054040822,0,0.121360521749513,0,0,5.25237866422918,1.48482340416319,9.21482106297696,0,0.140669416410513,0.445234820091624,0,0.211125408127993,0.597743964753209,1.38141957765574,1.0077309914171,0.409074730008619,0.861593638227486,0,1.25815691606258,0,0,1.28236427328014,2.3948309234694,0,0,0.0927680981618513,0,2.86470537193757,2.62379999988587,0.724999575434793,0.341380344856499,2.2882828526349,3.30942754475111,1.37897349296586,0.583209226766509,0.173624994933292,0,0.120596438625408,0,0,0,0.219385397153973,0.653630781113941,5.29810228258692,1.15425387755696,0,0.46112780877612,0.179515288819544,0.325942115766024,1.5950057986596,1.55715908783166,1.06606955203727,1.02193298195737,0.627921025580099,0.498635045700469,0,0,0,0,0.317873157960757,0.421996129056054,1.30586246527318,1.13082457147153,0,0,0.530745387020035,1.22206028986725,0.593042257361244,0.494255755786011,0.208843899010911,0,0,0,0,1.36965233252463,0.242780379534093,1.57833761139756,0,0,0.063186579628488,3.60776206594782,0.103688191397247,0.664653872707185,0.330991955875499,1.2557316736289,0,7.6844577428044,0.416024019039416,2.2562765983567,1.56787835863004,1.39294730528644,0.34945333648406,0.171986032471617,0,0,0,8.05008836853881,1.059073520298,0.90392296312213,0,0.397429223405979,0.0633107959558787,3.12882212375685,0.801588202515337,3.41524791582964,0.19980960958213,0.288180834308212,0.572682980829578,4.80465994013501,0,0.248505071130865,0.707082103850386,0.543616824294456,0.732219924186332,0.101998217636322,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,5.79069101447074,0.429226048136571,0.446342914883745,0.470284307407084,0,1.16495949527454,1.02418136999391,1.07140615895516,1.28066733322951,0.393709926058995,0,0,0.408610218334727,0.321506296930038,0,0.415440338029185,2.92466059016951,7.7380195455795,0.242998226632099,0,0.788057072991982,0.891727998294968,1.5840050477911,0.179287339332845,6.14128631422225,0,0,0.25426853765475,0,0.864221491201268,0,2.39460383124975,2.29859058098149,0,0.566560457600628,0.293104467356165,1.32506888912221,0.387848869084652,0.13223260174269,1.19760786519031,4.22889013390003,0.213574825135389,0.628817220398664,1.24271716604159,0.496166021811951,0,1.09613338542806,1.91502377331055,0,0.2506898940227,0,0,2.35581144375351,0,0.488105059607853,0.1251909307065,1.14681839138014,0.332787154610557,0.248385611765534,0.691743174681154,0,0.454947352624943,0,0,7.96169339871699,6.23160423026548,0,0,0,0,0,0,0.228840068396924,0,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0.181848659202559,0,0,0,1.20008329398946,0,0,1.26184898228651,0,1.28664954824955,2.08795433572169,0.226705925512272,0.694567422971502,0.244736704506468,0.358177682162975,0,0.877136198314828,0.530067437837643,0,0.337884881306145,0.256241518587947,0,0.303859956177382,0.553033744606923,0.194860308839388,0.132864840313363,0,0.655219697692825,0.245772908753719,0.211312123358627,0,0,0.172214979660816,2.27006381426734,0,0.559518030877778,0,0.127894371303652,0.431299245586727,0.471797825567689,0,0,0.425149840203366,0.371807292777007,0,0,0.630893960010027,2.40171224485641,0.705351887381368,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0.693153996902029,0,1.3807198521202,0,0.82731361184183,0.40341013740704,0,0,1.63771917510097,1.77427303460454,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,1.98484471355718,0,1.02209942111676,0.535701835878287,0,8.49751845931284,2.04895972216168,1.5966426629275,0.345701962667338,0.342976018874837,0.203909198930495,0.0657727735628491,0.709163045303809,1.00108261702862,2.51177897121645,0.471346769748006,3.92381028639305,0,0.431855182437243,2.8665101273223,0.571812353413251,0.94808167039636,1.51113852978563,0,0,0.414432328326074,0.6828739083758,7.60385627995501,4.30227358820278,0.118332000730565,0,0.423387050190929,1.60374807980835,0,0,1.78968690876468,1.3741032706134,0.365753774946808,0,0.205325613712494,1.1598144313382,4.37139893753226,1.16969731731053,2.38740930193642,0,0.33883824611688,1.31928620094515,3.92503393273351,1.15761237161917,0.218559560503957,5.17349025997675,0.735444965261716,4.47785439493089,0,0,0.8453114551668,0,0.469919589899268,0.902410431630081,0,0,0.352894871715692,0.481448200135009,0.730336388246517,3.21110498383179,0.430018749454354,0,0.0679914901909147,0,2.1161073620616,0,0,0,0,0,0.506794004045748,0.407955318967927,0,0.0918948995348449,0.250707539292375,0.151557396436479,0.535928260312357,0,0.103432995861895,5.75731751132648,0.952257725854961,3.22944549180031,4.34523000071005,0.33639558774184,1.0820016907288,0.202117188958219,7.83780292429061,3.08009970976753,8.89047099792555,3.08405483188508,0.99798106963804,1.05824249194267,0.320182037633146,0,1.07790242527904,2.34640942403454,0.977931553462932,0.813792356631477,1.99727032255654,3.01910690386539,0 | |||
|short_description=p1@PHLDB3 | |||
}} |
Latest revision as of 11:10, 18 September 2015
Short description: | p1@PHLDB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHLDB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_NM_198850, uc002own.3, uc002owo.2_5end |
EntrezGene: | PHLDB3 |
HGNC: | 30499 |
UniProt: | Q6NSJ2Q96HZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.52e-09 | 18 |
alpha-beta T cell | 2.52e-09 | 18 |
immature T cell | 2.52e-09 | 18 |
mature T cell | 2.52e-09 | 18 |
immature alpha-beta T cell | 2.52e-09 | 18 |
T cell | 8.37e-08 | 25 |
pro-T cell | 8.37e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 7.57e-08 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.79e-09 | 106 |