FFCP PHASE1:Hg19::chr19:50064061..50064072,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51070 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17946 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y314 | |||
|association_with_transcript=-112bp_to_BC011249_5end | |||
|cluster_id=chr19:50064061..50064072,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_NOSIP_5end | |||
|id=chr19:50064061..50064072,- | |||
|ontology_enrichment_celltype=CL:0000791!8.47e-37!18;CL:0000789!8.47e-37!18;CL:0002420!8.47e-37!18;CL:0002419!8.47e-37!18;CL:0000790!8.47e-37!18;CL:0000084!5.56e-31!25;CL:0000827!5.56e-31!25;CL:0000625!6.13e-26!11;CL:0000838!6.69e-22!52;CL:0000542!2.40e-21!53;CL:0000051!2.40e-21!53;CL:0000738!5.01e-15!140;CL:0002087!6.13e-15!119;CL:0000624!6.24e-15!6;CL:0002031!5.90e-11!124;CL:0000037!2.54e-10!172;CL:0000566!2.54e-10!172;CL:0000988!3.23e-09!182;CL:0002032!3.69e-08!165;CL:0000837!3.69e-08!165;CL:0000898!4.42e-08!3;CL:0000842!7.38e-08!3;CL:0000623!1.04e-07!3;CL:0000825!1.04e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.58e-59;18!CL:0000789;1.58e-59;18!CL:0002419;1.58e-59;18!CL:0000084;1.25e-41;25!CL:0000625;2.22e-41;11!CL:0000624;2.17e-23;6!CL:0000542;1.18e-12;53!CL:0000898;3.24e-12;3!CL:0000226;6.41e-12;3!CL:0000842;6.41e-12;3!CL:0000623;1.28e-11;3!CL:0000815;1.42e-08;2!CL:0000792;1.42e-08;2!CL:0002677;1.42e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.48e-59,18;CL:0000789,1.48e-59,18;CL:0002420,1.48e-59,18;CL:0002419,1.48e-59,18;CL:0000790,1.48e-59,18;CL:0000084,1.19e-41,25;CL:0000827,1.19e-41,25;CL:0000625,2.02e-41,11;CL:0000838,5.10e-25,52;CL:0000542,1.89e-24,53;CL:0000051,1.89e-24,53;CL:0000624,2.21e-23,6;CL:0002087,2.07e-14,115;CL:0000738,1.31e-13,136;CL:0000898,3.37e-12,3;CL:0000226,7.73e-12,3;CL:0000842,7.73e-12,3;CL:0000623,1.35e-11,3;CL:0000825,1.35e-11,3;CL:0002031,5.89e-10,120;CL:0000037,7.98e-10,168;CL:0000988,5.16e-09,177;CL:0000815,1.54e-08,2;CL:0000792,1.54e-08,2;CL:0002677,1.54e-08,2;CL:0002032,9.53e-08,161;CL:0000837,9.53e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.58e-59;18!CL:0000051;1.18e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.61e-20!15;UBERON:0000179!5.61e-20!15;UBERON:0000463!5.61e-20!15;UBERON:0004177!2.47e-07!7;UBERON:0002193!5.49e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.77e-27;15!UBERON:0000179;1.77e-27;15!UBERON:0000463;1.77e-27;15!UBERON:0002390;4.64e-11;32!UBERON:0002193;2.17e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.32e-27,15;UBERON:0000179,2.32e-27,15;UBERON:0000463,2.32e-27,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.309632246632152,0,0,0,0,0,0,0,1.20326668482085,1.30206522429511,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,8.65522988500866,7.8602152549833,8.01845846098086,0.83593247695339,6.8443675993054,7.57516489175573,3.89653456815823,2.45103005147382,2.3568472597987,3.32300841875432,1.35401931882508,1.28091319725675,1.95089021339817,3.12432018746985,4.97430032014527,3.76744011455568,9.93519973185805,10.4340922954988,8.36284190439814,4.98561107869291,6.89796888483458,11.3397057009268,6.83153168452658,10.8312240870193,9.11516835398986,9.50452044448374,7.98048131112196,5.75939750194883,3.74792179657038,7.81364931745256,8.21127996921047,2.82249440514625,2.40696176205157,5.93780055919476,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,2.95546140302891,3.45004119775228,2.18183161675572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,3.8828556147351,2.02782359826544,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,2.29391162142713,1.70894156152249,2.38231775457789,2.05681136543097,3.8908398671563,3.24018862342869,0.79312517629427,0,0,0,0,0,0.426851060090485,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.186224142887574,0,0.0636471582781649,0,0,0,0.336760265072938,0,0.332660356546013,0,0,0,0,0,0,0,0,1.00636896795513,0 | |||
|short_description=p5@NOSIP | |||
}} |
Latest revision as of 08:11, 19 September 2015
Short description: | p5@NOSIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NOSIP_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -112bp_to_BC011249_5end |
EntrezGene: | NOSIP |
HGNC: | 17946 |
UniProt: | Q9Y314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.48e-59 | 18 |
alpha-beta T cell | 1.48e-59 | 18 |
immature T cell | 1.48e-59 | 18 |
mature T cell | 1.48e-59 | 18 |
immature alpha-beta T cell | 1.48e-59 | 18 |
T cell | 1.19e-41 | 25 |
pro-T cell | 1.19e-41 | 25 |
CD8-positive, alpha-beta T cell | 2.02e-41 | 11 |
lymphoid lineage restricted progenitor cell | 5.10e-25 | 52 |
lymphocyte | 1.89e-24 | 53 |
common lymphoid progenitor | 1.89e-24 | 53 |
CD4-positive, alpha-beta T cell | 2.21e-23 | 6 |
nongranular leukocyte | 2.07e-14 | 115 |
leukocyte | 1.31e-13 | 136 |
naive T cell | 3.37e-12 | 3 |
single nucleate cell | 7.73e-12 | 3 |
mononuclear cell | 7.73e-12 | 3 |
natural killer cell | 1.35e-11 | 3 |
pro-NK cell | 1.35e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 5.89e-10 | 120 |
hematopoietic stem cell | 7.98e-10 | 168 |
hematopoietic cell | 5.16e-09 | 177 |
regulatory T cell | 1.54e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.54e-08 | 2 |
naive regulatory T cell | 1.54e-08 | 2 |
hematopoietic oligopotent progenitor cell | 9.53e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.53e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 2.32e-27 | 15 |
haemolymphatic fluid | 2.32e-27 | 15 |
organism substance | 2.32e-27 | 15 |