FFCP PHASE1:Hg19::chr1:156783824..156783836,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9047 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10821 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=66bp_to_ENST00000468744_5end | |||
|cluster_id=chr1:156783824..156783836,- | |||
|coexpression_cluster_id=C3884 | |||
|description=CAGE_peak_9_at_SH2D2A_5end | |||
|id=chr1:156783824..156783836,- | |||
|ontology_enrichment_celltype=CL:0000066!8.94e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0000317;2.02e-11;2!CL:1000448;2.02e-11;2!CL:0002308;2.02e-11;2!CL:0002140;2.02e-11;2!CL:0002592;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.02e-11,2;CL:1000448,2.02e-11,2;CL:0002308,2.02e-11,2;CL:0002140,2.02e-11,2;CL:0002592,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.36e-08;3 | |||
|ontology_enrichment_disease=DOID:305!3.16e-14!106;DOID:1036!1.99e-09!8;DOID:162!2.27e-09!235;DOID:0050687!2.30e-09!143;DOID:14566!7.53e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:4556;4.52e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.52e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.53e-11!9;UBERON:0000065!2.47e-07!53;UBERON:0008947!7.67e-07!38;UBERON:0003258!7.67e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.02e-11;2!UBERON:0007771;2.02e-11;2!UBERON:0003297;2.02e-11;2!UBERON:0001821;2.02e-11;2!UBERON:0003487;2.02e-11;2!UBERON:0001820;2.02e-11;2!UBERON:0001905;3.52e-11;2!UBERON:0002757;3.52e-11;2!UBERON:0010134;3.52e-11;2!UBERON:0005408;3.52e-11;2!UBERON:0001899;3.52e-11;2!UBERON:0003498;7.02e-08;3!UBERON:0005985;7.02e-08;3!UBERON:0001621;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.02e-11,2;UBERON:0007771,2.02e-11,2;UBERON:0003297,2.02e-11,2;UBERON:0001821,2.02e-11,2;UBERON:0003487,2.02e-11,2;UBERON:0001820,2.02e-11,2;UBERON:0005089,2.02e-11,2;UBERON:0005088,2.02e-11,2;UBERON:0001905,2.73e-11,2;UBERON:0002757,2.73e-11,2;UBERON:0010134,2.73e-11,2;UBERON:0005408,2.73e-11,2;UBERON:0001899,2.73e-11,2;UBERON:0001621,6.34e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0.365921118388786,0.530119073285941,0,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0,0,0.591534000199219,0,0.241011029883482,0.330881918197182,0.653638332277218,0.474541238222193,0.674156540800822,0.784885860501384,1.53898862778556,0,0,0,0,0,0,0,0,0.491953754172454,0,0.329250856225877,0,0.703702806881416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0,3.44559322797703,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0,0,0,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,1.11362469558097,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,2.47205811340139,0.211125408127993,0,0,0,0.102268682502155,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.653630781113941,0,0,0,0,0.179515288819544,0,0,0,0,0,0.31396051279005,0.166211681900156,0.676786981851542,0.588187602953219,0.839107934879214,0.569261198172555,0.317873157960757,0,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0.247127877893006,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0.0979923974143777,0.435296032902013,0,0,0.290268993867255,0.365446585430928,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,8.24721760931086,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0.968440444553616,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,1.60710550763486,0,0,0,0,0.115233987555779,0,0,0,0,0.333694205676207,0.078493092850514,0,0.280272163313789,0,0,0,0.0714765441766563,2.3702041759909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.687051635306701,0,0,0,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0,0.126166424835079,0.109265571963696,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p9@SH2D2A | |||
}} |
Latest revision as of 18:20, 17 September 2015
Short description: | p9@SH2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SH2D2A_5end |
Coexpression cluster: | C3884_large_Sebocyte_anaplastic_Keratinocyte_retinoblastoma_papillotubular_carcinoid |
Association with transcript: | 66bp_to_ENST00000468744_5end |
EntrezGene: | SH2D2A |
HGNC: | 10821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.02e-11 | 2 |
epithelial cell of sweat gland | 2.02e-11 | 2 |
epithelial cell of skin gland | 2.02e-11 | 2 |
acinar cell of sebaceous gland | 2.02e-11 | 2 |
smooth muscle cell of the coronary artery | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.02e-11 | 2 |
epidermis gland | 2.02e-11 | 2 |
gland of integumental system | 2.02e-11 | 2 |
sebaceous gland | 2.02e-11 | 2 |
skin sebaceous gland | 2.02e-11 | 2 |
sweat gland | 2.02e-11 | 2 |
sweat gland placode | 2.02e-11 | 2 |
sebaceous gland placode | 2.02e-11 | 2 |
pineal body | 2.73e-11 | 2 |
regional part of epithalamus | 2.73e-11 | 2 |
secretory circumventricular organ | 2.73e-11 | 2 |
circumventricular organ | 2.73e-11 | 2 |
epithalamus | 2.73e-11 | 2 |
coronary artery | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.52e-08 | 3 |