FFCP PHASE1:Hg19::chr1:16007955..16007970,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:16007955..16007970,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr1:16007955..16007970,+ | |||
|id=chr1:16007955..16007970,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.99e-15!254;CL:0000147!3.65e-12!14;CL:0000148!2.08e-11!10;CL:0000541!2.08e-11!10;CL:0002567!2.57e-08!3;CL:0002619!9.54e-08!3;CL:0000622!9.92e-08!5;CL:0000710!1.02e-07!20;CL:0002623!1.07e-07!3;CL:0002077!4.06e-07!33;CL:0002150!7.55e-07!3;CL:0000861!7.55e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.16e-74;10!CL:0000147;4.20e-53;14!CL:0002567;5.11e-47;3!CL:0000710;4.09e-37;20!CL:0000075;2.00e-27;27!CL:0002077;3.33e-19;34!CL:0002566;6.47e-17;1!CL:0000319;6.47e-17;1!CL:0000159;4.02e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.35e-74,10;CL:0000541,3.35e-74,10;CL:0000147,5.73e-53,14;CL:0002567,4.05e-47,3;CL:0000710,5.08e-37,20;CL:0000075,2.35e-27,27;CL:0002077,1.17e-21,34;CL:0000333,4.73e-17,41;CL:0000319,6.47e-17,1;CL:0002566,7.57e-17,1;CL:0000133,6.77e-12,59;CL:0000221,1.01e-09,72;CL:0000159,4.02e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.93e-16;1!CL:0000133;8.57e-07;59 | |||
|ontology_enrichment_disease=DOID:0050687!1.95e-10!143;DOID:305!3.45e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:3030;6.47e-17;1!DOID:114;6.93e-09;2!DOID:1909;6.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.47e-17,1;DOID:1909,5.49e-09,2;DOID:114,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.29e-14!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,1.6194683300949,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.441175890929576,0.217879444092406,0.237270619111097,0.674156540800822,0.98110732562673,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,7.30225784359944,7.63976851116555,16.4104426094066,6.84289784090821,1.13110241973656,6.30720421472227,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,1.44257416306811,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0.139423744278603,0,0.227884111694002,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.0870592065804026,0,0,0.19351266257817,0.365446585430928,0.328461828212837,0,0,0,0.137041924646751,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,1.28767814440971,0,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,1.99825733481477,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0.337884881306145,0,0.345430341731199,0.303859956177382,0,0,0,0,0.982829546539238,7.6189601713653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.62164849248911,0.85359238546975,0.691259661814092,0,0,0,0,0.22910686854405,0.31020638566432,0,0.447421727191169,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:16007955..16007970,+ | |||
}} |
Latest revision as of 23:14, 27 July 2015
Short description: | p@chr1:16007955..16007970, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:16007955..16007970, + |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.35e-74 | 10 |
melanoblast | 3.35e-74 | 10 |
pigment cell | 5.73e-53 | 14 |
light melanocyte | 4.05e-47 | 3 |
neurecto-epithelial cell | 5.08e-37 | 20 |
columnar/cuboidal epithelial cell | 2.35e-27 | 27 |
ecto-epithelial cell | 1.17e-21 | 34 |
migratory neural crest cell | 4.73e-17 | 41 |
mucus secreting cell | 6.47e-17 | 1 |
dark melanocyte | 7.57e-17 | 1 |
neurectodermal cell | 6.77e-12 | 59 |
ectodermal cell | 1.01e-09 | 72 |
seromucus secreting cell | 4.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.47e-17 | 1 |
melanoma | 5.49e-09 | 2 |
heart disease | 8.09e-09 | 2 |