FFCP PHASE1:Hg19::chr1:200452620..200452639,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:200452620..200452639,- | |||
|coexpression_cluster_id=C1842 | |||
|description=CAGE_peak_at_chr1:200452620..200452639,- | |||
|id=chr1:200452620..200452639,- | |||
|ontology_enrichment_celltype=CL:0000055!2.60e-16!180;CL:0000057!5.21e-16!75;CL:0002620!9.85e-11!23;CL:0002334!3.83e-10!12;CL:0000188!2.83e-07!9;CL:0000548!3.17e-07!679;CL:0000004!3.17e-07!679;CL:0000255!3.17e-07!679;CL:0000012!5.11e-07!682;CL:0000499!9.69e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.16e-18;12!CL:0002580;3.92e-15;3!CL:0002579;1.06e-14;3!CL:0002620;9.45e-09;23!CL:0000135;1.96e-07;3!CL:0000388;1.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.17e-18,12;CL:0002580,3.74e-15,3;CL:0002579,9.94e-15,3;CL:0000057,1.59e-13,76;CL:0002620,8.45e-09,23;CL:0000135,2.00e-07,3;CL:0000388,2.00e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;3.44e-10;2!DOID:1192;2.98e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,4.42e-10,2;DOID:1192,2.89e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.12e-08;9!UBERON:0000042;2.12e-08;9!UBERON:0003688;1.45e-07;6!UBERON:0002358;1.45e-07;6!UBERON:0003684;1.45e-07;6!UBERON:0001178;1.45e-07;6!UBERON:0007846;1.96e-07;3!UBERON:0000043;1.96e-07;3!UBERON:0007845;1.96e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.40e-07,6;UBERON:0002358,1.40e-07,6;UBERON:0003684,1.40e-07,6;UBERON:0001178,1.40e-07,6;UBERON:0007846,2.00e-07,3;UBERON:0000043,2.00e-07,3;UBERON:0007845,2.00e-07,3 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0.662794751455832,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.579386075843295,1.5905718941022,0.973269740605272,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,4.96971951695318,0.506522046658319,0.662045904066094,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0,0.751190294532984,0,0.538168907066586,0.213557388818567,5.72216133130817,0.300091096084402,0.309157587715317,1.54584324027377,0.558350568994769,4.72573730275545,3.41029518064195,2.52433774244115,3.03764665519588,0,0.710019185033229,0.403008392910561,1.3564847384839,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,1.32969058292435,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0.300946099727719,0,0,0,0.737476674166813,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,6.69891081110698,15.0392733822301,3.36792113319688,5.63812256725084,3.07024349440022,3.86049410744658,0,0.308419387605311,1.24293207719189,0.410635780069046,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.27470839445503,0.41254749960294,0,0,3.21367859688319,0.96670718292122,0.308097234229289,0.15350367472613,0.275673144969061,0.214840489736547,0.725083469571143,0.170453254832202,1.33548053470106,0.165284915360978,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,2.53329162357197,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,2.33748280548102,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0.173559738335131,0.0979923974143777,0.69647365264322,0.17472666824203,14.6188127600874,0,0,0,0,0,0,0.411125773940253,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,2.44893156579854,0,0.235694034616795,0,0,0,1.44475294950759,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,1.15149118391667,0,0,0.25426853765475,0.542999601753713,0,1.63293680054705,0,0,0,0,0,0,0,0,0.513260513652988,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,5.37540612648616,0.554805861502613,0.757612021100357,1.0062716070103,0,0,0,0.15543720058278,0.73927574994817,0,0,0,0,0.797525143673985,0,0.300515217994437,0,0,0.545545977607678,0,1.39210127963548,0,0,2.74716564146234,4.04099386519103,0,0.770479321629213,0,0,3.40058888268409,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,4.13405655849444,0,0,0,0,0,0,0,0,0,0,0,0,2.06110208852154,0,0.183428598521679,0.115525666150338,1.90691047733584,0,0,0,0.60511520611056,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0.685952037749674,0,0,2.36387681767936,0,0,0,0,0,6.69375532777726,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,4.41810498188324,0,0,0,0.357107877211315,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,6.69591032700152,0.462175628631418,5.62414530760926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0.0717222053926763,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:200452620..200452639,- | |||
}} |
Latest revision as of 02:01, 28 July 2015
Short description: | p@chr1:200452620..200452639, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:200452620..200452639, - |
Coexpression cluster: | C1842_Preadipocyte_epithelioid_Synoviocyte_tenocyte_renal_Fibroblast_spindle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.17e-18 | 12 |
preadipocyte of the breast | 3.74e-15 | 3 |
omentum preadipocyte | 9.94e-15 | 3 |
fibroblast | 1.59e-13 | 76 |
skin fibroblast | 8.45e-09 | 23 |
fibrocyte | 2.00e-07 | 3 |
tendon cell | 2.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.40e-07 | 6 |
peritoneum | 1.40e-07 | 6 |
abdominal cavity | 1.40e-07 | 6 |
visceral peritoneum | 1.40e-07 | 6 |
dense regular connective tissue | 2.00e-07 | 3 |
tendon | 2.00e-07 | 3 |
regular connective tissue | 2.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 4.42e-10 | 2 |
peripheral nervous system neoplasm | 2.89e-07 | 3 |