FFCP PHASE1:Hg19::chr1:201532269..201532289,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:201532269..201532289,+ | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_at_chr1:201532269..201532289,+ | |||
|id=chr1:201532269..201532289,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.21e-33!180;CL:0000057!3.08e-21!75;CL:0000048!2.88e-16!430;CL:0000723!2.09e-15!436;CL:0000034!2.64e-14!444;CL:0000680!1.42e-12!57;CL:0000056!1.42e-12!57;CL:0000355!1.42e-12!57;CL:0002620!7.27e-12!23;CL:0000187!1.45e-10!54;CL:0002334!2.01e-10!12;CL:0000183!1.84e-09!59;CL:0000393!3.00e-09!60;CL:0000211!3.00e-09!60;CL:0000192!2.63e-08!42;CL:0000514!2.63e-08!42;CL:0002371!3.35e-08!591;CL:0000359!5.11e-07!32;CL:0000144!9.42e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.91e-18;12!CL:0000097;2.14e-11;5!CL:0000056;9.84e-10;4!CL:0000515;5.98e-08;3!CL:0002580;7.93e-08;3!CL:0000048;1.52e-07;58!CL:0000134;1.53e-07;55!CL:0002579;1.70e-07;3!CL:0002620;5.48e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.34e-18,12;CL:0000057,8.60e-17,76;CL:0000048,7.44e-14,427;CL:0000723,2.06e-13,433;CL:0000034,7.70e-13,441;CL:0000097,1.45e-11,5;CL:0002028,1.45e-11,5;CL:0000219,2.47e-10,386;CL:0000134,4.43e-10,354;CL:0000515,7.26e-10,4;CL:0002320,1.34e-09,361;CL:0002580,6.69e-08,3;CL:0002579,1.26e-07,3;CL:0002620,6.16e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000515;9.84e-10;4 | |||
|ontology_enrichment_disease=DOID:2394!1.43e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.54e-13;14!DOID:17;1.25e-08;5!DOID:450;1.25e-08;5!DOID:66;1.25e-08;5!DOID:423;1.25e-08;5!DOID:0080000;1.25e-08;5!DOID:11722;1.25e-08;5!DOID:120;3.84e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.96e-13,14;DOID:17,1.32e-08,5;DOID:450,1.32e-08,5;DOID:66,1.32e-08,5;DOID:423,1.32e-08,5;DOID:0080000,1.32e-08,5;DOID:11722,1.32e-08,5;DOID:120,3.77e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.54e-11!70;UBERON:0000914!1.88e-11!83;UBERON:0002329!1.88e-11!83;UBERON:0003077!1.88e-11!83;UBERON:0003059!1.88e-11!83;UBERON:0007282!1.88e-11!83;UBERON:0009618!1.88e-11!83;UBERON:0007285!1.88e-11!83;UBERON:0002385!4.55e-11!63;UBERON:0001015!4.55e-11!63;UBERON:0000383!4.55e-11!63;UBERON:0001134!5.64e-11!61;UBERON:0002036!5.64e-11!61;UBERON:0003082!5.64e-11!61;UBERON:0000486!1.40e-08!82;UBERON:0002199!3.32e-08!45;UBERON:0002416!3.32e-08!45;UBERON:0002097!4.40e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;2.35e-08;5!UBERON:0000992;2.37e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.72e-09,371;UBERON:0000992,2.44e-08,13;UBERON:0002118,3.23e-08,5 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,0,0,0,0,1.26343974685366,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,1.5905718941022,0.486634870302636,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,1.45650098894541,1.72101972449288,0,0,1.06748995729705,1.72667283892012,0.622422070799533,0,0.163461903113459,0,0,0.70296429550139,0.312160076830321,0.570471821544449,0.597794722207204,0.23486899728753,0,0.280901613404497,1.83738754129404,0.245668634623536,0.516628905878827,0,0,0,0,0.168336113954066,0,2.21651292387346,0.438977620880838,0,0.150238058906597,0,0.358779271377724,3.63047560991565,10.3846631568185,3.00091096084402,6.69841440049853,1.28820270022815,3.35010341396862,1.18143432568886,0.389748020644795,2.52433774244115,4.97069452668416,0,0.710019185033229,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41929561685538,2.20121085033065,1.86595303986695,1.15295962733569,1.8936365013957,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0,0.1466765716419,18.2273119218467,0,0.845302752556,4.25500986535793,3.12022310734098,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,0,1.42636905040718,1.59259437334337,3.6985738059069,5.37182889719687,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.315404830067869,0.234282829985426,1.20378439891088,0,0,0.664225598535437,2.76553752812555,0.955719759148911,0,0,0,0,0,0,0,0,5.95458738765064,2.76231551918512,1.40330047216537,1.53766979106841,1.53512174720011,4.98647155545183,0,4.31787142647436,9.58833316690886,0.98552587216571,5.71179872101983,1.97557643381931,0,0,0,1.14814448164607,1.82091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.340906509664404,0.712256285173899,0,0,0,0,0.464845549297286,2.51849877464512,1.3940745403212,0.308033580176089,0.532306030317022,1.73986598415015,1.29726953372744,0.286249773483982,0,0,0,0.511795582622668,0,0.318203247925937,0,0.719489830333259,0,0.824686816419805,0.404364963146632,0,0,0,0.243713489631284,1.05650146756755,0.409499734223957,1.27264888758341,1.13008116620243,1.65409603063837,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0.563391205064483,0.286822704408103,1.08073945114433,0,0.354761064070598,0.211107635297664,0,0.379473173765715,1.39973888097993,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,54.8613517500114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,12.579047947765,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98797195464504,0,0,0,0.31900115973192,2.10674464824283,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,11.6950502080699,0,0,0,0,0,0.225980740780532,3.56309004081552,1.19228767021794,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,3.53350935791397,3.66109962093166,0,0.866851769704557,0,0,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0.199679000498991,1.28767814440971,0.446342914883745,0.268733889946905,15.4928949923234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0.113312091520126,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,2.68658645196373,7.47882591511118,3.32883516901568,0.189403005275089,0,0,0.457680136793847,0.907385542579434,2.17612080815893,1.77426179987561,1.91156120596443,2.24901556081802,4.03683687878274,0.414706207840855,3.45594228925393,8.34792098898774,0.150257608997218,0.380805212168795,0.406870733204662,4.54621648006399,1.07410557042488,6.03243887842042,9.9523972174654,0,1.03018711554838,0.336749488765919,2.52369796457302,0.192619830407303,0,0,0,0,1.22368352253234,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0.690359926060101,0,0.0752103283492573,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0.53570183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| |||
|short_description=p@chr1:201532269..201532289,+ | |||
}} |
Latest revision as of 02:10, 28 July 2015
Short description: | p@chr1:201532269..201532289, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201532269..201532289, + |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.34e-18 | 12 |
fibroblast | 8.60e-17 | 76 |
multi fate stem cell | 7.44e-14 | 427 |
somatic stem cell | 2.06e-13 | 433 |
stem cell | 7.70e-13 | 441 |
mast cell | 1.45e-11 | 5 |
basophil mast progenitor cell | 1.45e-11 | 5 |
motile cell | 2.47e-10 | 386 |
mesenchymal cell | 4.43e-10 | 354 |
skeletal muscle myoblast | 7.26e-10 | 4 |
connective tissue cell | 1.34e-09 | 361 |
preadipocyte of the breast | 6.69e-08 | 3 |
omentum preadipocyte | 1.26e-07 | 3 |
skin fibroblast | 6.16e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.72e-09 | 371 |
female gonad | 2.44e-08 | 13 |
right ovary | 3.23e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.96e-13 | 14 |
musculoskeletal system disease | 1.32e-08 | 5 |
myotonic disease | 1.32e-08 | 5 |
muscle tissue disease | 1.32e-08 | 5 |
myopathy | 1.32e-08 | 5 |
muscular disease | 1.32e-08 | 5 |
myotonic dystrophy | 1.32e-08 | 5 |
female reproductive organ cancer | 3.77e-07 | 27 |