FFCP PHASE1:Hg19::chr1:32041196..32041215,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000435872_5end | |||
|cluster_id=chr1:32041196..32041215,- | |||
|description=CAGE_peak_1_at_ENST00000435872_5end | |||
|id=chr1:32041196..32041215,- | |||
|ontology_enrichment_celltype=CL:0000223!1.75e-22!59;CL:0002076!1.25e-17!43;CL:0000066!1.82e-15!254;CL:0002251!1.46e-12!21;CL:0002178!1.71e-07!3;CL:0002621!7.22e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.91e-09;1!CL:1001319;3.82e-09;1!CL:1000600;3.82e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.35e-09,1;CL:1001319,4.50e-09,1;CL:1000600,4.50e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.21e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.44e-26!106;DOID:0050687!7.67e-19!143;DOID:1749!5.07e-15!14;DOID:299!1.24e-12!25;DOID:162!5.27e-10!235;DOID:14566!1.50e-09!239;DOID:7!5.40e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;4.83e-11;25!DOID:0050619;1.91e-09;1!DOID:2152;1.91e-09;1!DOID:1357;1.91e-09;1!DOID:1799;3.82e-09;1!DOID:10165;3.82e-09;1!DOID:1798;3.82e-09;1!DOID:0050615;3.21e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.71e-14,106;DOID:0050687,2.63e-11,143;DOID:299,5.29e-11,25;DOID:0050619,1.56e-09,1;DOID:1357,1.56e-09,1;DOID:2152,2.35e-09,1;DOID:1799,5.28e-09,1;DOID:10165,5.28e-09,1;DOID:1798,5.28e-09,1;DOID:0050615,2.89e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.35e-31!155;UBERON:0001555!3.35e-31!155;UBERON:0007026!3.35e-31!155;UBERON:0004119!4.46e-30!169;UBERON:0000925!4.46e-30!169;UBERON:0006595!4.46e-30!169;UBERON:0004921!8.79e-25!129;UBERON:0004185!8.79e-25!129;UBERON:0005409!1.82e-20!35;UBERON:0000160!9.86e-20!27;UBERON:0000077!3.74e-18!130;UBERON:0005911!1.47e-17!82;UBERON:0003929!8.70e-14!54;UBERON:0002108!3.15e-13!14;UBERON:0000466!1.98e-12!126;UBERON:0001041!1.42e-11!98;UBERON:0000161!6.59e-11!35;UBERON:0000344!7.04e-11!12;UBERON:0002075!7.98e-11!18;UBERON:0002294!9.74e-11!7;UBERON:0001173!9.74e-11!7;UBERON:0004912!9.74e-11!7;UBERON:0000481!2.55e-10!347;UBERON:0002114!3.37e-10!12;UBERON:0001045!1.01e-09!11;UBERON:0000464!1.62e-09!104;UBERON:0005153!1.36e-08!37;UBERON:0000062!1.61e-08!511;UBERON:0001046!2.99e-08!19;UBERON:0005177!4.72e-08!107;UBERON:0001264!7.15e-08!10;UBERON:0003922!7.15e-08!10;UBERON:0003923!7.15e-08!10;UBERON:0003924!7.15e-08!10;UBERON:0003921!7.15e-08!10;UBERON:0000059!1.69e-07!11;UBERON:0001004!1.77e-07!72;UBERON:0003104!2.69e-07!238;UBERON:0009142!2.69e-07!238;UBERON:0002110!3.55e-07!3;UBERON:0006242!3.55e-07!3;UBERON:0000166!4.12e-07!21;UBERON:0009497!5.54e-07!25;UBERON:0000015!5.54e-07!25;UBERON:0002423!5.54e-07!25;UBERON:0006235!5.54e-07!25;UBERON:0004161!5.54e-07!25;UBERON:0009856!6.94e-07!26;UBERON:0002553!7.06e-07!70;UBERON:0001949!7.22e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.36e-12;22!UBERON:0000059;3.83e-12;11!UBERON:0000160;2.86e-11;17!UBERON:0004921;6.42e-10;33!UBERON:0001154;1.21e-09;1!UBERON:0001153;1.21e-09;1!UBERON:0009854;1.21e-09;1!UBERON:0004911;1.91e-09;1!UBERON:0001764;1.91e-09;1!UBERON:0001825;1.91e-09;1!UBERON:0004645;3.82e-09;1!UBERON:0001256;3.82e-09;1!UBERON:0001259;3.82e-09;1!UBERON:0009856;5.51e-09;4!UBERON:0001155;9.80e-09;9!UBERON:0004907;1.50e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,3.22e-12,11;UBERON:0000160,2.62e-11,17;UBERON:0005409,6.85e-11,25;UBERON:0004921,9.02e-11,118;UBERON:0001007,1.02e-09,145;UBERON:0001555,1.02e-09,145;UBERON:0007026,1.02e-09,145;UBERON:0001154,1.21e-09,1;UBERON:0001153,1.21e-09,1;UBERON:0001045,1.21e-09,1;UBERON:0001764,1.56e-09,1;UBERON:0001825,1.56e-09,1;UBERON:0004911,2.35e-09,1;UBERON:0004645,4.50e-09,1;UBERON:0001256,4.50e-09,1;UBERON:0001259,4.50e-09,1;UBERON:0001155,8.60e-09,9;UBERON:0004119,1.47e-08,160;UBERON:0000925,1.47e-08,160;UBERON:0006595,1.47e-08,160;UBERON:0004907,1.46e-07,5;UBERON:0001046,6.07e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.802025881213139,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,3.59169090190492,0,0.102268682502155,0,0,1.79736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.568967241427498,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,1.16684937732704,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.979396848954886,0.141353071433941,0,1.99052386215701,0.796118080530053,7.33236173920351,0,0,0,0,0,0,0,0.978323094660449,0,0,2.41981432097328,0,0,0,0,0,1.323967823502,0.941798755221676,0,0,0,1.04135843001079,0.195984794828755,0.69647365264322,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0.160317640503067,0.85381197895741,0.19980960958213,2.16135625731159,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,3.49487848582361,0.787831823072237,0.494495150286999,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,2.98402782875445,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,2.25739752552359,0,0.917142992608395,0.808679663052368,0,0,0,0,0,0.781514011233092,1.04762677792569,0,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.682986574053893,0,0,0,0,0,0.590969204419841,1.33477682270483,0.078493092850514,0,0,3.65263488203798,0,0,0,0,0,0,0,0,0,0,3.8720462293825,0,0,0,1.60374807980835,0,0,2.01339777236026,0.588901401691458,4.75479907430851,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.71421575442263,2.47026410200984,6.25882660175512,0,0.917458566809082,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0.763765899337979,0.404234377916439,0,0,0.0673520530145875,0.215166616178029,0,1.22104902916462,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000435872 | |||
}} |
Latest revision as of 07:12, 28 July 2015
Short description: | p1@ENST00000435872 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000435872_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000435872_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.35e-09 | 1 |
bladder cell | 4.50e-09 | 1 |
lower urinary tract cell | 4.50e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
large intestine | 3.22e-12 | 11 |
intestine | 2.62e-11 | 17 |
gastrointestinal system | 6.85e-11 | 25 |
subdivision of digestive tract | 9.02e-11 | 118 |
digestive system | 1.02e-09 | 145 |
digestive tract | 1.02e-09 | 145 |
primitive gut | 1.02e-09 | 145 |
vermiform appendix | 1.21e-09 | 1 |
caecum | 1.21e-09 | 1 |
midgut | 1.21e-09 | 1 |
maxillary sinus | 1.56e-09 | 1 |
paranasal sinus | 1.56e-09 | 1 |
epithelium of female gonad | 2.35e-09 | 1 |
urinary bladder urothelium | 4.50e-09 | 1 |
wall of urinary bladder | 4.50e-09 | 1 |
mucosa of urinary bladder | 4.50e-09 | 1 |
colon | 8.60e-09 | 9 |
endoderm-derived structure | 1.47e-08 | 160 |
endoderm | 1.47e-08 | 160 |
presumptive endoderm | 1.47e-08 | 160 |
lower digestive tract | 1.46e-07 | 5 |
hindgut | 6.07e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.71e-14 | 106 |
cell type cancer | 2.63e-11 | 143 |
adenocarcinoma | 5.29e-11 | 25 |
paranasal sinus cancer | 1.56e-09 | 1 |
maxillary sinus cancer | 1.56e-09 | 1 |
ovary epithelial cancer | 2.35e-09 | 1 |
islet cell tumor | 5.28e-09 | 1 |
endocrine pancreas cancer | 5.28e-09 | 1 |
pancreatic endocrine carcinoma | 5.28e-09 | 1 |
respiratory system cancer | 2.89e-08 | 16 |