FFCP PHASE1:Mm9::chr10:117993582..117993598,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=187|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:117993582..117993598,-|id=chr10:117993582..117993598,-|ontology_enrichment_celltype=CL:0000553!2.39e-08!6;CL:0000556!2.39e-08!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.67e-20,9;CL:0000789,1.67e-20,9;CL:0002420,1.67e-20,9;CL:0002419,1.67e-20,9;CL:0000790,1.67e-20,9;CL:0000084,8.49e-17,11;CL:0000827,8.49e-17,11;CL:0000838,2.10e-15,12;CL:0000624,6.48e-15,8;CL:0000542,3.17e-14,13;CL:0000051,3.17e-14,13;CL:0002031,4.90e-14,25;CL:0000738,6.91e-11,17;CL:0002087,6.91e-11,17;CL:0000988,7.12e-11,32;CL:0002032,7.12e-11,32;CL:0000037,7.12e-11,32;CL:0000837,7.12e-11,32;CL:0000625,5.23e-09,1;CL:0000815,6.23e-09,1;CL:0000792,6.23e-09,1;CL:0002320,2.04e-07,46;CL:0000134,2.04e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.24e-14!48;UBERON:0002390!1.70e-13!45;UBERON:0003061!1.70e-13!45;UBERON:0004177!9.25e-13!29;UBERON:0000065!2.81e-11!41;UBERON:0001004!6.76e-11!42;UBERON:0002405!7.85e-11!70;UBERON:0006562!8.54e-10!24;UBERON:0001557!8.54e-10!24;UBERON:0001042!8.54e-10!24;UBERON:0008814!8.54e-10!24;UBERON:0009145!8.54e-10!24;UBERON:0002370!8.71e-09!23;UBERON:0000974!8.71e-09!23;UBERON:0004807!8.71e-09!23;UBERON:0005058!8.71e-09!23;UBERON:0003351!8.71e-09!23;UBERON:0009113!8.71e-09!23;UBERON:0003295!8.71e-09!23;UBERON:0009722!8.71e-09!23;UBERON:0005562!8.71e-09!23;UBERON:0007690!8.71e-09!23;UBERON:0005057!1.48e-08!51;UBERON:0000072!2.24e-08!27;UBERON:0003408!2.61e-08!24;UBERON:0001041!7.22e-08!92;UBERON:0000077!7.41e-08!97;UBERON:0003081!2.39e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.57e-11,6;UBERON:0004457,1.57e-11,6;UBERON:0000042,1.57e-11,6;UBERON:0004854,1.57e-11,6;UBERON:0009034,1.57e-11,6;UBERON:0002095,1.57e-11,6;UBERON:0004782,1.57e-11,6;UBERON:0003281,1.57e-11,6;UBERON:0009664,1.57e-11,6;UBERON:0002296,1.57e-11,6;UBERON:0005602,1.57e-11,6;UBERON:0001179,1.57e-11,6;UBERON:0006293,1.57e-11,6;UBERON:0002193,3.46e-09,48;UBERON:0002405,3.46e-09,48;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1;UBERON:0002390,1.70e-07,45;UBERON:0003061,1.70e-07,45;UBERON:0002384,2.04e-07,46;UBERON:0003887,3.87e-07,10|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0,0,0,0,1.02720437958723,2.62261207256992,0.333109761815663,0.607425802169478,0,2.05050407482854,2.33094537129756,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,17.1407837562657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,21.2329064590681,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73393409276564,0,0,0.376736914009382,1.50363650493128,1.37266903923914,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0,0,0.39736270956253,0.600977247599844,0,0.100966449948148,0.381034033274999,0.201652370273681,0.487289403698762,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr10:117993582..117993598,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=187 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:117993582..117993598,- | |||
|description=CAGE_peak_at_chr10:117993582..117993598,- | |||
|id=chr10:117993582..117993598,- | |||
|ontology_enrichment_celltype=CL:0000553!2.39e-08!6;CL:0000556!2.39e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.67e-20,9;CL:0000789,1.67e-20,9;CL:0002420,1.67e-20,9;CL:0002419,1.67e-20,9;CL:0000790,1.67e-20,9;CL:0000084,8.49e-17,11;CL:0000827,8.49e-17,11;CL:0000838,2.10e-15,12;CL:0000624,6.48e-15,8;CL:0000542,3.17e-14,13;CL:0000051,3.17e-14,13;CL:0002031,4.90e-14,25;CL:0000738,6.91e-11,17;CL:0002087,6.91e-11,17;CL:0000988,7.12e-11,32;CL:0002032,7.12e-11,32;CL:0000037,7.12e-11,32;CL:0000837,7.12e-11,32;CL:0000625,5.23e-09,1;CL:0000815,6.23e-09,1;CL:0000792,6.23e-09,1;CL:0002320,2.04e-07,46;CL:0000134,2.04e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.24e-14!48;UBERON:0002390!1.70e-13!45;UBERON:0003061!1.70e-13!45;UBERON:0004177!9.25e-13!29;UBERON:0000065!2.81e-11!41;UBERON:0001004!6.76e-11!42;UBERON:0002405!7.85e-11!70;UBERON:0006562!8.54e-10!24;UBERON:0001557!8.54e-10!24;UBERON:0001042!8.54e-10!24;UBERON:0008814!8.54e-10!24;UBERON:0009145!8.54e-10!24;UBERON:0002370!8.71e-09!23;UBERON:0000974!8.71e-09!23;UBERON:0004807!8.71e-09!23;UBERON:0005058!8.71e-09!23;UBERON:0003351!8.71e-09!23;UBERON:0009113!8.71e-09!23;UBERON:0003295!8.71e-09!23;UBERON:0009722!8.71e-09!23;UBERON:0005562!8.71e-09!23;UBERON:0007690!8.71e-09!23;UBERON:0005057!1.48e-08!51;UBERON:0000072!2.24e-08!27;UBERON:0003408!2.61e-08!24;UBERON:0001041!7.22e-08!92;UBERON:0000077!7.41e-08!97;UBERON:0003081!2.39e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.57e-11,6;UBERON:0004457,1.57e-11,6;UBERON:0000042,1.57e-11,6;UBERON:0004854,1.57e-11,6;UBERON:0009034,1.57e-11,6;UBERON:0002095,1.57e-11,6;UBERON:0004782,1.57e-11,6;UBERON:0003281,1.57e-11,6;UBERON:0009664,1.57e-11,6;UBERON:0002296,1.57e-11,6;UBERON:0005602,1.57e-11,6;UBERON:0001179,1.57e-11,6;UBERON:0006293,1.57e-11,6;UBERON:0002193,3.46e-09,48;UBERON:0002405,3.46e-09,48;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1;UBERON:0002390,1.70e-07,45;UBERON:0003061,1.70e-07,45;UBERON:0002384,2.04e-07,46;UBERON:0003887,3.87e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0,0,0,0,1.02720437958723,2.62261207256992,0.333109761815663,0.607425802169478,0,2.05050407482854,2.33094537129756,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,17.1407837562657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,21.2329064590681,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73393409276564,0,0,0.376736914009382,1.50363650493128,1.37266903923914,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0,0,0.39736270956253,0.600977247599844,0,0.100966449948148,0.381034033274999,0.201652370273681,0.487289403698762,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr10:117993582..117993598,- | |||
}} |
Latest revision as of 22:51, 3 August 2015
Short description: | p@chr10:117993582..117993598, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:117993582..117993598, - |
Coexpression cluster: | MCL_coexpression_mm9:187 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.67e-20 | 9 |
alpha-beta T cell | 1.67e-20 | 9 |
immature T cell | 1.67e-20 | 9 |
mature T cell | 1.67e-20 | 9 |
immature alpha-beta T cell | 1.67e-20 | 9 |
T cell | 8.49e-17 | 11 |
pro-T cell | 8.49e-17 | 11 |
lymphoid lineage restricted progenitor cell | 2.10e-15 | 12 |
CD4-positive, alpha-beta T cell | 6.48e-15 | 8 |
lymphocyte | 3.17e-14 | 13 |
common lymphoid progenitor | 3.17e-14 | 13 |
hematopoietic lineage restricted progenitor cell | 4.90e-14 | 25 |
leukocyte | 6.91e-11 | 17 |
nongranular leukocyte | 6.91e-11 | 17 |
hematopoietic cell | 7.12e-11 | 32 |
hematopoietic oligopotent progenitor cell | 7.12e-11 | 32 |
hematopoietic stem cell | 7.12e-11 | 32 |
hematopoietic multipotent progenitor cell | 7.12e-11 | 32 |
CD8-positive, alpha-beta T cell | 5.23e-09 | 1 |
regulatory T cell | 6.23e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.23e-09 | 1 |
connective tissue cell | 2.04e-07 | 46 |
mesenchymal cell | 2.04e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.57e-11 | 6 |
cavity lining | 1.57e-11 | 6 |
serous membrane | 1.57e-11 | 6 |
gastrointestinal system mesentery | 1.57e-11 | 6 |
stomach region | 1.57e-11 | 6 |
mesentery | 1.57e-11 | 6 |
gastrointestinal system serosa | 1.57e-11 | 6 |
mesentery of stomach | 1.57e-11 | 6 |
gut mesentery | 1.57e-11 | 6 |
dorsal mesentery | 1.57e-11 | 6 |
dorsal mesogastrium | 1.57e-11 | 6 |
peritoneal cavity | 1.57e-11 | 6 |
spleen primordium | 1.57e-11 | 6 |
hemolymphoid system | 3.46e-09 | 48 |
immune system | 3.46e-09 | 48 |
lymph node | 4.39e-09 | 1 |
axillary lymph node | 4.39e-09 | 1 |
peripheral lymph node | 4.39e-09 | 1 |
shoulder | 4.39e-09 | 1 |
hematopoietic system | 1.70e-07 | 45 |
blood island | 1.70e-07 | 45 |
connective tissue | 2.04e-07 | 46 |
intraembryonic coelom | 3.87e-07 | 10 |