FFCP PHASE1:Hg19::chr2:201170596..201170619,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26010 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NUQ6,C9IZC3 | |||
|association_with_transcript=0bp_to_ENST00000409718,ENST00000439084,NM_015535,uc002uvn.3,uc002uvo.3,uc010fst.2_5end | |||
|cluster_id=chr2:201170596..201170619,+ | |||
|description=CAGE_peak_10_at_SPATS2L_5end | |||
|id=chr2:201170596..201170619,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.51e-18!254;CL:0000223!1.27e-08!59;CL:0002076!5.07e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.02e-13;42!CL:0002231;3.73e-10;3!CL:0002368;4.95e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-17,253;CL:0000223,5.31e-16,58;CL:0002076,7.56e-15,42;CL:0002231,3.26e-10,3;CL:0002368,5.01e-08,13 | |||
|ontology_enrichment_development_v019=CL:0000223;5.99e-10;58 | |||
|ontology_enrichment_disease=DOID:0050687!1.49e-17!143;DOID:305!3.60e-16!106;DOID:14566!9.33e-10!239;DOID:162!9.39e-10!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.69e-10;14!DOID:4468;3.01e-07;2!DOID:305;6.92e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.30e-15,143;DOID:305,5.21e-15,106;DOID:1749,3.15e-10,14;DOID:162,4.86e-08,235;DOID:14566,1.07e-07,239;DOID:7,2.97e-07,39;DOID:4468,3.23e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.67e-10!169;UBERON:0000925!3.67e-10!169;UBERON:0006595!3.67e-10!169;UBERON:0000475!2.23e-09!365;UBERON:0001007!1.57e-08!155;UBERON:0001555!1.57e-08!155;UBERON:0007026!1.57e-08!155;UBERON:0005911!1.86e-08!82;UBERON:0000481!1.11e-07!347;UBERON:0000119!6.40e-07!312;UBERON:0000153!8.80e-07!129;UBERON:0007811!8.80e-07!129;UBERON:0000033!9.39e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;9.44e-08;4!UBERON:0004785;9.44e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.15e-08,4;UBERON:0004785,5.15e-08,4;UBERON:0004119,1.10e-07,160;UBERON:0000925,1.10e-07,160;UBERON:0006595,1.10e-07,160;UBERON:0000161,9.76e-07,36 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,0,0,0.661743720148475,0.221729397462564,1.05401742831751,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,1.82032272387605,0,0.168336113954066,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0.600182192168805,0.206105058476878,0,0,0.337552664482532,0,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0.773043412653187,1.36373060295417,1.43402297694502,0.853815942907168,0.397589304964456,1.04574548582567,0.621966330092223,0.756962552626885,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,1.47586126251736,0.343135620597051,0,1.1240175325762,0.603173834469785,0.648119116109707,0,0,0,0.231860809950154,0.469634776943287,0,0,0.190254152234598,0,1.71697232418975,0,0,0.297262324577456,0,1.51183915378974,0.283550194484773,0.358234090811393,0.581267877027924,0.383382679165211,0.985326475791887,0.352193736052904,0.621984346622316,0.720599767084807,0.25248486685276,0.126995788584338,0,0,0,0.205654985406647,0,0.857479297891735,0.112131084345361,0.43596006883328,0.80672114403045,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0.587403472388222,0.343143423810856,0,0,0,0.606255142892519,0,0,0,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0,0,0.246381468041427,0.519254429183621,0,1.45031339509947,2.40607764363942,3.22283461275637,0,0.910455840033585,0,0.451199612907412,0.616122696835318,0,0,0.633309773357254,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,1.02580050046556,0,0.650756789328606,0.309123034943167,0.183138929636687,0,0,0,0,0.870036464629098,0.154048617114644,0.15350367472613,0.413509717453592,0.644521469209642,0.145016693914229,0.0852266274161009,3.73934549716297,2.47927373041467,1.72971060628596,3.1903178123646,1.31505115112215,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0.855877976067841,0,0,0.359744915166629,0.54907405947211,0.353437207037059,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0.876901770507525,0,0,0.202910376962704,0.6196469961995,0,0.573645408816206,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0.282431402330337,1.29151611801369,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0,0.19538809540204,0.556812347790485,0,0,0,0,0.748562161632879,0,0,0.222886768554957,0.568272293612826,0,0,0,1.9882952955326,0.562677665642051,0.667852230137435,0.494411622680279,0,0.597743964753209,0.276283915531148,0,0.102268682502155,0,0,0.539210106883961,1.79021174675609,0,0.0986434056369336,0,0,0,0.278304294485554,0,1.5625665665114,0,0.724999575434793,0.341380344856499,9.91589236141789,0.709163045303809,0.689486746482929,0.583209226766509,0.347249989866585,0,0.361789315876224,0,0.442317039724898,1.77328571372128,0.438770794307945,0.10893846351899,0.975966209950223,0.384751292518985,0,0,0.448788222048861,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,4.85295548414462,1.30586246527318,0.565412285735763,0,0,0,0,0,0,0,0.067401132980677,0,0,0,1.9566461893209,0.728341138602278,0.394584402849391,0,0.30607276163049,0.063186579628488,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0.173559738335131,0.293977192243133,2.08942095792966,0.34945333648406,0,0.387025325156341,0.292357268344742,0.246346371159628,0.387956065953678,0.441280633457501,0,1.09633539717401,0.794858446811959,0.50648636764703,1.75996244461323,0.881747022766871,0.426905989478705,0,0.432271251462318,0,1.02956998717179,1.4405479798815,0.621262677827163,1.88555227693436,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,1.49688046383725,0.988990300573997,2.08950985947973,0.590564889088493,0.0846733320657845,0,0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| |||
|short_description=p10@SPATS2L | |||
}} |
Latest revision as of 10:08, 19 September 2015
Short description: | p10@SPATS2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SPATS2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409718, ENST00000439084, NM_015535, uc002uvn.3, uc002uvo.3, uc010fst.2_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | Q9NUQ6C9IZC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.91e-17 | 253 |
endodermal cell | 5.31e-16 | 58 |
endo-epithelial cell | 7.56e-15 | 42 |
epithelial cell of prostate | 3.26e-10 | 3 |
respiratory epithelial cell | 5.01e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.15e-08 | 4 |
respiratory system mucosa | 5.15e-08 | 4 |
endoderm-derived structure | 1.10e-07 | 160 |
endoderm | 1.10e-07 | 160 |
presumptive endoderm | 1.10e-07 | 160 |
orifice | 9.76e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.30e-15 | 143 |
carcinoma | 5.21e-15 | 106 |
squamous cell carcinoma | 3.15e-10 | 14 |
cancer | 4.86e-08 | 235 |
disease of cellular proliferation | 1.07e-07 | 239 |
disease of anatomical entity | 2.97e-07 | 39 |
clear cell adenocarcinoma | 3.23e-07 | 2 |