FFCP PHASE1:Hg19::chr9:15307143..15307151,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:15307143..15307151,-
|short_description=p5@TTC39B
|description=CAGE_peak_5_at_TTC39B_5end
|association_with_transcript=57bp_to_ENST00000541445_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=158219 | |EntrezGene=158219 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23704 | |HGNC=23704 | ||
|TSSclassifier=strong | |||
|UniProt=B4DVQ6 | |UniProt=B4DVQ6 | ||
|association_with_transcript=57bp_to_ENST00000541445_5end | |||
|cluster_id=chr9:15307143..15307151,- | |||
|coexpression_cluster_id=C4810 | |||
|description=CAGE_peak_5_at_TTC39B_5end | |||
|id=chr9:15307143..15307151,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.98e-14;5!CL:0000840;1.59e-08;5!CL:0000163;8.02e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.39e-14,5;CL:0002028,1.39e-14,5;CL:0000557,8.88e-12,67;CL:0000839,1.23e-10,66;CL:0000766,2.28e-09,72;CL:0000840,1.62e-08,5;CL:0001029,1.62e-08,5;CL:0000163,6.64e-08,9;CL:0002009,7.13e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.12e-12,76;UBERON:0004765,1.38e-11,90;UBERON:0001474,6.19e-11,82;UBERON:0001434,7.78e-10,100;UBERON:0002405,5.27e-09,93;UBERON:0002390,2.81e-08,98;UBERON:0003061,2.81e-08,98;UBERON:0002193,4.88e-07,108 | |||
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| ||
|short_description=p5@TTC39B | |||
}} | }} |
Latest revision as of 19:02, 16 September 2015
Short description: | p5@TTC39B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TTC39B_5end |
Coexpression cluster: | C4810_Mast_squamous_Dendritic_Macrophage_small_temporal_CD4 |
Association with transcript: | 57bp_to_ENST00000541445_5end |
EntrezGene: | TTC39B |
HGNC: | 23704 |
UniProt: | B4DVQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.39e-14 | 5 |
basophil mast progenitor cell | 1.39e-14 | 5 |
granulocyte monocyte progenitor cell | 8.88e-12 | 67 |
myeloid lineage restricted progenitor cell | 1.23e-10 | 66 |
myeloid leukocyte | 2.28e-09 | 72 |
immature conventional dendritic cell | 1.62e-08 | 5 |
common dendritic progenitor | 1.62e-08 | 5 |
endocrine cell | 6.64e-08 | 9 |
macrophage dendritic cell progenitor | 7.13e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.12e-12 | 76 |
skeletal element | 1.38e-11 | 90 |
bone element | 6.19e-11 | 82 |
skeletal system | 7.78e-10 | 100 |
immune system | 5.27e-09 | 93 |
hematopoietic system | 2.81e-08 | 98 |
blood island | 2.81e-08 | 98 |
hemolymphoid system | 4.88e-07 | 108 |