Personal tools

FFCP PHASE1:Mm9::chr11:53270775..53270802,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=71774|HGNC=|MCL_coexpression_id=2682|UniProt=D3Z3D5|association_with_transcript=0bp_to_ENSMUST00000093114_5end|description=CAGE_peak_2_at_Shroom1_5end|id=chr11:53270775..53270802,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.07e-12!25;UBERON:0002330!1.07e-12!25;UBERON:0004111!9.59e-12!122;UBERON:0002107!7.42e-11!22;UBERON:0007499!7.42e-11!22;UBERON:0006925!7.42e-11!22;UBERON:0009497!7.42e-11!22;UBERON:0000015!7.42e-11!22;UBERON:0002423!7.42e-11!22;UBERON:0006235!7.42e-11!22;UBERON:0008835!7.42e-11!22;UBERON:0003894!7.42e-11!22;UBERON:0004161!7.42e-11!22;UBERON:0008836!7.42e-11!22;UBERON:0005256!1.16e-10!47;UBERON:0009854!1.03e-09!23;UBERON:0009856!1.03e-09!23;UBERON:0000025!3.28e-09!114;UBERON:0003914!7.39e-07!47;UBERON:0007023!9.03e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.42e-16,25;UBERON:0002330,6.42e-16,25;UBERON:0002107,1.95e-13,22;UBERON:0007499,1.95e-13,22;UBERON:0006925,1.95e-13,22;UBERON:0009497,1.95e-13,22;UBERON:0000015,1.95e-13,22;UBERON:0002423,1.95e-13,22;UBERON:0006235,1.95e-13,22;UBERON:0008835,1.95e-13,22;UBERON:0003894,1.95e-13,22;UBERON:0004161,1.95e-13,22;UBERON:0008836,1.95e-13,22;UBERON:0009854,1.73e-12,23;UBERON:0009856,1.73e-12,23;UBERON:0005256,6.03e-12,45;UBERON:0004111,9.07e-09,122;UBERON:0003104,1.91e-08,61;UBERON:0009142,1.91e-08,61;UBERON:0000949,5.89e-08,72;UBERON:0002530,2.28e-07,65;UBERON:0003914,5.52e-07,47|phase1_expression=2.40223270657191,1.04692622291808,0,0.90739263392049,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.47997726838022,0.68822784320151,0,0.86152399231815,0.215471232685889,0.760093677825496,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.367093504323363,20.342174953049,0,0.659058548203415,1.1665793944457,0.979904951377538,0,0,0,0,2.82985379639542,1.14613375975503,1.03134418455488,0.404632921719196,0.528990979272033,1.26766280701236,2.37191172448392,4.4464739805557,0,0,0,0,0.384218305321555,0.414758449233911,0.270011876663381,1.47227472945967,1.14260393761521,0.220868540951614,0.489963196859816,0.766763768145891,0,2.20231761998777,1.53224805702225,1.68967186581868,1.05509030184155,0.823388792421687,1.04182674111352,3.07101298901519,1.12552522006336,2.13917546887534,0.883885756421003,0.854230084794618,0.559198337475902,0,0.151143120213571,8.69593466105033,16.3480536626463,15.6393406752783,22.6675340487883,48.0834548911275,18.8171292580881,6.17955448579708,0,0,0,11.4083170019111,0,0,0,1.5154372870785,1.01343946190039,1.01104889002957,6.96521666286266,0.517875767294343,3.26572705942614,0,0.304465478312141,0.922461989024234,1.50722640552623,2.11659672844269,1.38233250462643,4.44950941921873,0.722996784599558,0,0.647067399789637,0,1.45462575940567,0,4.09893115816166,2.72280718857492,0.766371165625774,0,0,0,1.64769703345305,2.28750301409313,0.251308704225729,1.73824320192276,1.79000820131231,2.90903262383384,1.94689515681309,0.509196819251581,1.24406970610093,5.05445516867349,3.15662783829711,0.390361328888111,0.459804208866946,0.540186389416048,0.30140963567143,0.272145996605311,0.384341160854549,0.468508622798644,1.81092359517311,1.07783996466421,1.70195472151037,1.23165786914764,0.657587197282725,0.834141747676794,0,0.411564272815887,0,0,0,0,0.414251545071004,0.938104239924385,1.62055855314913,1.89395788468168,1.18058539048442,0.308534225774757,0.697601834251224,0.268273401399619,0.350296027101508,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0.268412837520744,1.05144974282064,1.3377599609307,2.31293148088659,3.43785736662608,0.213288250535234,0,0.38660238396628,0.80673409849337,0.444756087689741,0.380451252225118,0.949058123089023,1.15289268306808,3.01602250560323,3.18330355265841,2.53453313254856,0,0.864552199498777,0.597423819763102,0.189667900953082,0.571242563048644,1.1270773567308,0.203651327845314,0.581857461502877,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,34.0920521150221,0.500535317148282,1.37591296579242,0.449724224769707,2.02860121388503,2.17059443777175,2.03700681425136,5.75392274901621,3.72911021582581,5.21666685057355,2.87536413054709,5.58211421502755,7.48890415474945,12.6289438973556,20.6307025550199,23.639732546805,0.554259570499814,0.37898282354097,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0.975668239288994,0.315270288212382,0.44292937929755,0.637819074629948,0.327726629431476,0.345369963731791,0.289298117163023,0,0,23.6046851049137,8.55403913544671,5.45872005958493,3.39913891117389,1.14754461763673,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,1.92792789853084,0.851640511249612,0.534196811001766,0,0.494910368917606,15.9294166007955,0.242780636154981,0,1.13163047853539,2.65771703592696,2.76691633149535,1.03371317267288,2.54473610634254,1.78248689192361,6.95280867458795,6.32511651449993,7.21948802737308,1.02131881726136,2.34079422240703,3.36332577835162,1.92903331528433,2.48276327099183,0.713475270408282,1.97458824722545,1.8267896946876,10.0908834467395,19.0648863777438,10.5853631066382,0.32977250588296,0,0.241251699712623,0.119372344003136,0.328281799490123,3.20628920292836,8.34413859047294,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,11.4560474161814,0,0.406638934253697,0.108005340821801,0,1.09181281873089,2.02296519577231,2.97552440611209,6.02038666563268,0.129614973291793,6.83473244395618,0.56369293868419,0.448549638131936,0.330916980914195,0,0.387479470433193,0.675824501963113,0.469428954583016,0.2604087696879,0.314578033277133,0.241584120826006,0.288030006257865,0,0.405450430580328,0.616265742988964,0.25984164595559,0,0.596044064343795,0,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.680191150845634,3.7737612073591,4.12683740403588,8.22634620183984,6.56844619709447,0.93841237725591,0,0.643105137237198,13.0408747049194,0.564751842617067,0.460325236507177,2.86447756719698,0.859265911718438,0,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0.31136204275253,0.798049746802062,1.87806966329548,0.972426868273176,0.419226325255965,0.551530525350042,0.666740183404846,0,1.60459604795908,1.76888048234658,1.01391719956096,0.943131706930381,0.749132059759059,0.89635213366817,0.976402972245426,0.952587382566147,1.27472758539341,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0.715308569841963,1.0174249164263,0.376437521661322,1.09998990259179,1.46342378298218,0.526139422875686,0.814824683075171,1.12228454331548,0.593175090620871,0.886540341380071,1.22769312950907,0.77468420592983,1.35034627686799,0.499621155875892,0.233931608445408,0.429742108096597,1.53030665655075,0.220591419119515,0.927471342481686|short_description=p2@Shroom1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71774
|HGNC=
|MCL_coexpression_id=2682
|TSSclassifier=NA
|UniProt=D3Z3D5
|association_with_transcript=0bp_to_ENSMUST00000093114_5end
|cluster_id=chr11:53270775..53270802,+
|description=CAGE_peak_2_at_Shroom1_5end
|id=chr11:53270775..53270802,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!1.07e-12!25;UBERON:0002330!1.07e-12!25;UBERON:0004111!9.59e-12!122;UBERON:0002107!7.42e-11!22;UBERON:0007499!7.42e-11!22;UBERON:0006925!7.42e-11!22;UBERON:0009497!7.42e-11!22;UBERON:0000015!7.42e-11!22;UBERON:0002423!7.42e-11!22;UBERON:0006235!7.42e-11!22;UBERON:0008835!7.42e-11!22;UBERON:0003894!7.42e-11!22;UBERON:0004161!7.42e-11!22;UBERON:0008836!7.42e-11!22;UBERON:0005256!1.16e-10!47;UBERON:0009854!1.03e-09!23;UBERON:0009856!1.03e-09!23;UBERON:0000025!3.28e-09!114;UBERON:0003914!7.39e-07!47;UBERON:0007023!9.03e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.42e-16,25;UBERON:0002330,6.42e-16,25;UBERON:0002107,1.95e-13,22;UBERON:0007499,1.95e-13,22;UBERON:0006925,1.95e-13,22;UBERON:0009497,1.95e-13,22;UBERON:0000015,1.95e-13,22;UBERON:0002423,1.95e-13,22;UBERON:0006235,1.95e-13,22;UBERON:0008835,1.95e-13,22;UBERON:0003894,1.95e-13,22;UBERON:0004161,1.95e-13,22;UBERON:0008836,1.95e-13,22;UBERON:0009854,1.73e-12,23;UBERON:0009856,1.73e-12,23;UBERON:0005256,6.03e-12,45;UBERON:0004111,9.07e-09,122;UBERON:0003104,1.91e-08,61;UBERON:0009142,1.91e-08,61;UBERON:0000949,5.89e-08,72;UBERON:0002530,2.28e-07,65;UBERON:0003914,5.52e-07,47
|phase1_expression=2.40223270657191,1.04692622291808,0,0.90739263392049,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.47997726838022,0.68822784320151,0,0.86152399231815,0.215471232685889,0.760093677825496,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.367093504323363,20.342174953049,0,0.659058548203415,1.1665793944457,0.979904951377538,0,0,0,0,2.82985379639542,1.14613375975503,1.03134418455488,0.404632921719196,0.528990979272033,1.26766280701236,2.37191172448392,4.4464739805557,0,0,0,0,0.384218305321555,0.414758449233911,0.270011876663381,1.47227472945967,1.14260393761521,0.220868540951614,0.489963196859816,0.766763768145891,0,2.20231761998777,1.53224805702225,1.68967186581868,1.05509030184155,0.823388792421687,1.04182674111352,3.07101298901519,1.12552522006336,2.13917546887534,0.883885756421003,0.854230084794618,0.559198337475902,0,0.151143120213571,8.69593466105033,16.3480536626463,15.6393406752783,22.6675340487883,48.0834548911275,18.8171292580881,6.17955448579708,0,0,0,11.4083170019111,0,0,0,1.5154372870785,1.01343946190039,1.01104889002957,6.96521666286266,0.517875767294343,3.26572705942614,0,0.304465478312141,0.922461989024234,1.50722640552623,2.11659672844269,1.38233250462643,4.44950941921873,0.722996784599558,0,0.647067399789637,0,1.45462575940567,0,4.09893115816166,2.72280718857492,0.766371165625774,0,0,0,1.64769703345305,2.28750301409313,0.251308704225729,1.73824320192276,1.79000820131231,2.90903262383384,1.94689515681309,0.509196819251581,1.24406970610093,5.05445516867349,3.15662783829711,0.390361328888111,0.459804208866946,0.540186389416048,0.30140963567143,0.272145996605311,0.384341160854549,0.468508622798644,1.81092359517311,1.07783996466421,1.70195472151037,1.23165786914764,0.657587197282725,0.834141747676794,0,0.411564272815887,0,0,0,0,0.414251545071004,0.938104239924385,1.62055855314913,1.89395788468168,1.18058539048442,0.308534225774757,0.697601834251224,0.268273401399619,0.350296027101508,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0.268412837520744,1.05144974282064,1.3377599609307,2.31293148088659,3.43785736662608,0.213288250535234,0,0.38660238396628,0.80673409849337,0.444756087689741,0.380451252225118,0.949058123089023,1.15289268306808,3.01602250560323,3.18330355265841,2.53453313254856,0,0.864552199498777,0.597423819763102,0.189667900953082,0.571242563048644,1.1270773567308,0.203651327845314,0.581857461502877,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,34.0920521150221,0.500535317148282,1.37591296579242,0.449724224769707,2.02860121388503,2.17059443777175,2.03700681425136,5.75392274901621,3.72911021582581,5.21666685057355,2.87536413054709,5.58211421502755,7.48890415474945,12.6289438973556,20.6307025550199,23.639732546805,0.554259570499814,0.37898282354097,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0.975668239288994,0.315270288212382,0.44292937929755,0.637819074629948,0.327726629431476,0.345369963731791,0.289298117163023,0,0,23.6046851049137,8.55403913544671,5.45872005958493,3.39913891117389,1.14754461763673,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,1.92792789853084,0.851640511249612,0.534196811001766,0,0.494910368917606,15.9294166007955,0.242780636154981,0,1.13163047853539,2.65771703592696,2.76691633149535,1.03371317267288,2.54473610634254,1.78248689192361,6.95280867458795,6.32511651449993,7.21948802737308,1.02131881726136,2.34079422240703,3.36332577835162,1.92903331528433,2.48276327099183,0.713475270408282,1.97458824722545,1.8267896946876,10.0908834467395,19.0648863777438,10.5853631066382,0.32977250588296,0,0.241251699712623,0.119372344003136,0.328281799490123,3.20628920292836,8.34413859047294,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,11.4560474161814,0,0.406638934253697,0.108005340821801,0,1.09181281873089,2.02296519577231,2.97552440611209,6.02038666563268,0.129614973291793,6.83473244395618,0.56369293868419,0.448549638131936,0.330916980914195,0,0.387479470433193,0.675824501963113,0.469428954583016,0.2604087696879,0.314578033277133,0.241584120826006,0.288030006257865,0,0.405450430580328,0.616265742988964,0.25984164595559,0,0.596044064343795,0,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.680191150845634,3.7737612073591,4.12683740403588,8.22634620183984,6.56844619709447,0.93841237725591,0,0.643105137237198,13.0408747049194,0.564751842617067,0.460325236507177,2.86447756719698,0.859265911718438,0,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0.31136204275253,0.798049746802062,1.87806966329548,0.972426868273176,0.419226325255965,0.551530525350042,0.666740183404846,0,1.60459604795908,1.76888048234658,1.01391719956096,0.943131706930381,0.749132059759059,0.89635213366817,0.976402972245426,0.952587382566147,1.27472758539341,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0.715308569841963,1.0174249164263,0.376437521661322,1.09998990259179,1.46342378298218,0.526139422875686,0.814824683075171,1.12228454331548,0.593175090620871,0.886540341380071,1.22769312950907,0.77468420592983,1.35034627686799,0.499621155875892,0.233931608445408,0.429742108096597,1.53030665655075,0.220591419119515,0.927471342481686
|short_description=p2@Shroom1
}}

Latest revision as of 16:25, 1 October 2015

Short description:p2@Shroom1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Shroom1_5end
Coexpression cluster:MCL_coexpression_mm9:2682
Association with transcript: 0bp_to_ENSMUST00000093114_5end
EntrezGene:Shroom1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Shroom1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B720.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C822.67
Mouse hepatocyte, donor6.CNhs13090.11822-124F448.08
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B234.09
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A312.63
liver, neonate N25.CNhs11198.1368-26H120.63
liver, neonate N30.CNhs11106.1382-42D123.64
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B623.60
mammary gland, adult pregnant day19.CNhs10476.588-5H28.55
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I710.09
placenta, adult pregnant day17.CNhs10464.577-18G319.06
prostate, adult.CNhs10470.859-1F810.59
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A92.98
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.13
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.23
urinary bladder, adult.CNhs10481.879-12E46.57
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland6.42e-1625
exocrine system6.42e-1625
liver1.95e-1322
epithelial sac1.95e-1322
digestive gland1.95e-1322
epithelium of foregut-midgut junction1.95e-1322
anatomical boundary1.95e-1322
hepatobiliary system1.95e-1322
foregut-midgut junction1.95e-1322
hepatic diverticulum1.95e-1322
liver primordium1.95e-1322
septum transversum1.95e-1322
liver bud1.95e-1322
digestive tract diverticulum1.73e-1223
sac1.73e-1223
trunk mesenchyme6.03e-1245
anatomical conduit9.07e-09122
mesenchyme1.91e-0861
entire embryonic mesenchyme1.91e-0861
endocrine system5.89e-0872
gland2.28e-0765
epithelial tube5.52e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:53270775..53270802,%2B&oldid=4311555"