FFCP PHASE1:Hg19::chr3:187957646..187957656,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |||
|TSSclassifier=strong | |||
|UniProt=C9JIY7 | |||
|association_with_transcript=0bp_to_ENST00000457242_5end | |||
|cluster_id=chr3:187957646..187957656,+ | |||
|coexpression_cluster_id=C1222 | |||
|description=CAGE_peak_43_at_LPP_5end | |||
|id=chr3:187957646..187957656,+ | |||
|ontology_enrichment_celltype=CL:0000313!1.83e-13!1;CL:0000815!1.28e-07!2;CL:0000792!1.28e-07!2;CL:0002677!1.28e-07!2;CL:1000487!1.99e-07!2;CL:0000159!2.25e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.23e-66;1 | |||
|ontology_enrichment_disease=DOID:2152!1.83e-13!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.13e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001154!3.08e-14!1;UBERON:0001153!3.08e-14!1;UBERON:0002372!3.98e-14!1;UBERON:0001961!3.98e-14!1;UBERON:0001744!3.98e-14!1;UBERON:0001735!3.98e-14!1;UBERON:0000029!5.15e-14!1;UBERON:0002146!8.58e-14!1;UBERON:0005623!8.58e-14!1;UBERON:0004911!1.83e-13!1;UBERON:0004909!2.25e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.23e-66;1!UBERON:0001153;1.23e-66;1!UBERON:0009854;1.23e-66;1!UBERON:0002372;4.66e-66;1!UBERON:0001961;4.66e-66;1!UBERON:0001744;4.66e-66;1!UBERON:0001042;4.66e-66;1!UBERON:0001735;4.66e-66;1!UBERON:0006562;7.05e-34;2!UBERON:0009856;7.35e-18;4!UBERON:0004907;1.40e-14;5!UBERON:0001155;1.04e-08;9!UBERON:0004921;5.59e-08;33!UBERON:0002465;6.56e-08;10!UBERON:0000059;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.23e-66,1;UBERON:0001153,1.23e-66,1;UBERON:0001045,1.23e-66,1;UBERON:0002372,4.66e-66,1;UBERON:0001961,4.66e-66,1;UBERON:0001744,4.66e-66,1;UBERON:0001735,4.66e-66,1;UBERON:0004907,1.40e-14,5;UBERON:0001155,1.04e-08,9;UBERON:0002465,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0000059,2.32e-07,11;UBERON:0006562,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81004004352262,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,6.07824614168525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83906702183149,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p43@LPP | |||
}} |
Latest revision as of 07:40, 17 September 2015
Short description: | p43@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_LPP_5end |
Coexpression cluster: | C1222_appendix_Burkitt_tonsil_lymph_diffuse_lymphoma_salivary |
Association with transcript: | 0bp_to_ENST00000457242_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | C9JIY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.23e-66 | 1 |
caecum | 1.23e-66 | 1 |
midgut | 1.23e-66 | 1 |
tonsil | 4.66e-66 | 1 |
mucosa-associated lymphoid tissue | 4.66e-66 | 1 |
lymphoid tissue | 4.66e-66 | 1 |
tonsillar ring | 4.66e-66 | 1 |
lower digestive tract | 1.40e-14 | 5 |
colon | 1.04e-08 | 9 |
lymphoid system | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
large intestine | 2.32e-07 | 11 |
pharynx | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.13e-08 | 10 |