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FFCP PHASE1:Mm9::chr12:8778254..8778270,+: Difference between revisions

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{{FFCP|EntrezGene=20969|HGNC=|MCL_coexpression_id=2049|UniProt=P18828|association_with_transcript=35bp_to_ENSMUST00000171158_5end|description=CAGE_peak_3_at_Sdc1_5end|id=chr12:8778254..8778270,+|ontology_enrichment_celltype=CL:0000223!4.61e-08!20;CL:0000066!8.45e-07!25|ontology_enrichment_celltype_v019_2=CL:0000223,3.40e-08,20;CL:0000066,7.50e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!9.09e-11!130;UBERON:0000925!9.09e-11!130;UBERON:0006595!9.09e-11!130;UBERON:0001007!3.82e-10!128;UBERON:0001555!3.82e-10!128;UBERON:0007026!3.82e-10!128;UBERON:0004921!1.50e-09!126;UBERON:0004185!1.50e-09!126;UBERON:0009854!3.27e-07!23;UBERON:0009856!3.27e-07!23;UBERON:0002107!5.46e-07!22;UBERON:0007499!5.46e-07!22;UBERON:0006925!5.46e-07!22;UBERON:0009497!5.46e-07!22;UBERON:0000015!5.46e-07!22;UBERON:0002423!5.46e-07!22;UBERON:0006235!5.46e-07!22;UBERON:0008835!5.46e-07!22;UBERON:0003894!5.46e-07!22;UBERON:0004161!5.46e-07!22;UBERON:0008836!5.46e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.68e-12,118;UBERON:0000925,1.68e-12,118;UBERON:0006595,1.68e-12,118;UBERON:0001007,8.06e-12,116;UBERON:0001555,8.06e-12,116;UBERON:0007026,8.06e-12,116;UBERON:0004921,3.61e-11,114;UBERON:0000160,5.44e-08,31;UBERON:0005409,1.88e-07,47;UBERON:0009854,2.51e-07,23;UBERON:0009856,2.51e-07,23;UBERON:0002107,4.24e-07,22;UBERON:0007499,4.24e-07,22;UBERON:0006925,4.24e-07,22;UBERON:0009497,4.24e-07,22;UBERON:0000015,4.24e-07,22;UBERON:0002423,4.24e-07,22;UBERON:0006235,4.24e-07,22;UBERON:0008835,4.24e-07,22;UBERON:0003894,4.24e-07,22;UBERON:0004161,4.24e-07,22;UBERON:0008836,4.24e-07,22|phase1_expression=0.80074423552397,6.2815573375085,9.09998478779072,17.2404600444893,18.5331420080148,10.2406355866253,6.07392865548367,0,0.422366166455,0.70219357896598,0,0,0,0.0874204024189974,1.66554880907831,0.202475267389826,0,0.630924330716475,0.548457734422955,0,3.57181818634493,0.595745707205312,0,16.6392119705143,15.5998311125676,9.18771142584032,7.32295393470427,8.61884930743556,51.4963466726773,29.4875251819119,23.5034341294623,0.635030673459631,1.84519436275371,0,11.8429164098023,12.1351291111699,13.4751775133164,0,0,0,0,0,0,19.3881099682389,17.8423398946346,10.0950713688925,12.5182615095686,0.872100625521786,1.75748946187577,2.3331587888914,5.5994568650145,5.75010257459886,1.51004345451963,0,0,2.82985379639542,4.01146815914259,2.06268836910977,0.606949382578793,1.05798195854407,0.633831403506179,23.041428180701,24.0109594950008,40.0455374190223,41.5323872278129,44.7602472416043,13.4820049733282,6.53171119046643,1.14058573539325,0.675029691658453,1.47227472945967,0.285650984403804,0.662605622854841,1.10241719293459,0.575072826109418,0,0,0.127687338085188,0,0.791317726381163,0.548925861614458,0.52091337055676,0.279182999001381,0,0.15279824777681,0.589257170947335,1.28134512719193,0.745597783301202,4.99792875999015,6.72586884950391,1.15945795480671,36.1378028332182,122.394840067395,89.0510266202398,120.208637227819,60.9316566452376,24.0159958425296,22.4968025803036,22.0818103912438,22.2603931941514,0,21.815501160434,30.5766287647975,14.2213340630666,75.5553733129137,76.0079596425296,80.3783867573505,24.3211663801598,0.776813650941515,0.593768556259299,3.29622120855658,6.08930956624282,3.92046345335299,2.71300752994721,2.11659672844269,0.879666139307728,2.22475470960936,0.722996784599558,0.884610551949874,7.117741397686,2.65009822152472,4.84875253135222,11.1835056730873,0.585561594023094,0.209446706813455,9.19645398750929,0.718890747035522,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0,0,0,0.162241263067758,3.46253837091075,5.47390670684409,13.1415834385511,6.31325567659422,6.63614259109789,5.28774840196988,5.94205028357652,4.06903008156431,2.65342346690179,2.69038812598185,2.43624483855295,5.17406741478031,21.5567992932842,12.8592134514117,18.2989169130507,22.5771604400402,29.4730084179134,22.984642990463,27.3690241422565,3.98068533636986,0,0,0,3.31401236056803,2.34526059981096,2.70093092191522,2.13070262026689,1.57411385397923,1.07986979021165,1.39520366850245,1.3413670069981,0.934122738937356,1.81015834904829,0.492502392237286,1.13496333364198,1.02339991197733,1.09775057645525,0.805238512562231,0,0.720332286654991,6.60837565967596,6.08236303326152,4.26576501070468,5.80591679651096,7.34544529535932,7.05892336181699,10.6741461045538,7.41879941838981,13.2868137232463,7.41145296258049,10.5560787696113,8.95304124185179,10.1381325301942,14.3811105384675,17.5071820398502,13.541606581297,4.1726938209678,2.74196430263349,4.50830942692322,1.4255592949172,1.74557238450863,2.17421041659988,1.51767689098217,1.18088118383682,0.941992367048249,1.1105744752962,46.5430624526824,1.83529616287703,4.12773889737726,3.37293168577281,4.26006254915856,5.788251834058,4.32863948028414,7.19240343627027,11.5116011010275,29.6526326243128,31.629005436018,42.7962089818779,60.2232709111102,52.7889854909464,49.5136861320478,95.0413737085833,16.9972934953276,4.54779388249163,5.0519142697028,4.2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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20969
|HGNC=
|MCL_coexpression_id=2049
|TSSclassifier=NA
|UniProt=P18828
|association_with_transcript=35bp_to_ENSMUST00000171158_5end
|cluster_id=chr12:8778254..8778270,+
|description=CAGE_peak_3_at_Sdc1_5end
|id=chr12:8778254..8778270,+
|ontology_enrichment_celltype=CL:0000223!4.61e-08!20;CL:0000066!8.45e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000223,3.40e-08,20;CL:0000066,7.50e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.68e-12,118;UBERON:0000925,1.68e-12,118;UBERON:0006595,1.68e-12,118;UBERON:0001007,8.06e-12,116;UBERON:0001555,8.06e-12,116;UBERON:0007026,8.06e-12,116;UBERON:0004921,3.61e-11,114;UBERON:0000160,5.44e-08,31;UBERON:0005409,1.88e-07,47;UBERON:0009854,2.51e-07,23;UBERON:0009856,2.51e-07,23;UBERON:0002107,4.24e-07,22;UBERON:0007499,4.24e-07,22;UBERON:0006925,4.24e-07,22;UBERON:0009497,4.24e-07,22;UBERON:0000015,4.24e-07,22;UBERON:0002423,4.24e-07,22;UBERON:0006235,4.24e-07,22;UBERON:0008835,4.24e-07,22;UBERON:0003894,4.24e-07,22;UBERON:0004161,4.24e-07,22;UBERON:0008836,4.24e-07,22
|phase1_expression=0.80074423552397,6.2815573375085,9.09998478779072,17.2404600444893,18.5331420080148,10.2406355866253,6.07392865548367,0,0.422366166455,0.70219357896598,0,0,0,0.0874204024189974,1.66554880907831,0.202475267389826,0,0.630924330716475,0.548457734422955,0,3.57181818634493,0.595745707205312,0,16.6392119705143,15.5998311125676,9.18771142584032,7.32295393470427,8.61884930743556,51.4963466726773,29.4875251819119,23.5034341294623,0.635030673459631,1.84519436275371,0,11.8429164098023,12.1351291111699,13.4751775133164,0,0,0,0,0,0,19.3881099682389,17.8423398946346,10.0950713688925,12.5182615095686,0.872100625521786,1.75748946187577,2.3331587888914,5.5994568650145,5.75010257459886,1.51004345451963,0,0,2.82985379639542,4.01146815914259,2.06268836910977,0.606949382578793,1.05798195854407,0.633831403506179,23.041428180701,24.0109594950008,40.0455374190223,41.5323872278129,44.7602472416043,13.4820049733282,6.53171119046643,1.14058573539325,0.675029691658453,1.47227472945967,0.285650984403804,0.662605622854841,1.10241719293459,0.575072826109418,0,0,0.127687338085188,0,0.791317726381163,0.548925861614458,0.52091337055676,0.279182999001381,0,0.15279824777681,0.589257170947335,1.28134512719193,0.745597783301202,4.99792875999015,6.72586884950391,1.15945795480671,36.1378028332182,122.394840067395,89.0510266202398,120.208637227819,60.9316566452376,24.0159958425296,22.4968025803036,22.0818103912438,22.2603931941514,0,21.815501160434,30.5766287647975,14.2213340630666,75.5553733129137,76.0079596425296,80.3783867573505,24.3211663801598,0.776813650941515,0.593768556259299,3.29622120855658,6.08930956624282,3.92046345335299,2.71300752994721,2.11659672844269,0.879666139307728,2.22475470960936,0.722996784599558,0.884610551949874,7.117741397686,2.65009822152472,4.84875253135222,11.1835056730873,0.585561594023094,0.209446706813455,9.19645398750929,0.718890747035522,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0,0,0,0.162241263067758,3.46253837091075,5.47390670684409,13.1415834385511,6.31325567659422,6.63614259109789,5.28774840196988,5.94205028357652,4.06903008156431,2.65342346690179,2.69038812598185,2.43624483855295,5.17406741478031,21.5567992932842,12.8592134514117,18.2989169130507,22.5771604400402,29.4730084179134,22.984642990463,27.3690241422565,3.98068533636986,0,0,0,3.31401236056803,2.34526059981096,2.70093092191522,2.13070262026689,1.57411385397923,1.07986979021165,1.39520366850245,1.3413670069981,0.934122738937356,1.81015834904829,0.492502392237286,1.13496333364198,1.02339991197733,1.09775057645525,0.805238512562231,0,0.720332286654991,6.60837565967596,6.08236303326152,4.26576501070468,5.80591679651096,7.34544529535932,7.05892336181699,10.6741461045538,7.41879941838981,13.2868137232463,7.41145296258049,10.5560787696113,8.95304124185179,10.1381325301942,14.3811105384675,17.5071820398502,13.541606581297,4.1726938209678,2.74196430263349,4.50830942692322,1.4255592949172,1.74557238450863,2.17421041659988,1.51767689098217,1.18088118383682,0.941992367048249,1.1105744752962,46.5430624526824,1.83529616287703,4.12773889737726,3.37293168577281,4.26006254915856,5.788251834058,4.32863948028414,7.19240343627027,11.5116011010275,29.6526326243128,31.629005436018,42.7962089818779,60.2232709111102,52.7889854909464,49.5136861320478,95.0413737085833,16.9972934953276,4.54779388249163,5.0519142697028,4.2436271443797,4.92849521405854,15.0755631697634,25.7087132156895,33.5629874315414,10.4039195110086,10.1873757238436,11.6401981119966,9.83179888294428,10.7064688756855,12.150520920847,18.0949540727127,23.3879444042045,3.44234991113325,1.10374698521893,0,0,6.72133276044369,1.26235463602186,3.78609863299508,0.390438744296638,0.861693590931196,2.86762557543062,4.45597348164788,3.11384183867716,2.02405350837447,4.09158201075837,3.95287777946523,0.963963949265421,7.52282451603824,6.05423052468668,6.02681749608232,6.43383479592888,0,5.09839335925461,4.23252979750651,1.13163047853539,2.95301892880773,2.76691633149535,3.87642439752332,2.90826983582004,3.56497378384721,1.8962205476149,3.16255825724996,0,0.340439605753788,3.24109969256358,2.45781499187234,3.00071849044229,3.54680467284547,5.70780216326626,4.60737257685939,3.95804433848979,27.2219181353904,10.1679394014634,3.52845436887939,37.429179417716,17.7610869365496,18.9382584274409,36.2891925769535,65.3280780985344,16.9058885245313,0,0.854354403989263,1.44470807574256,0.370389054739423,0,0,0,1.18984900995699,2.37917468950219,1.52019971184866,21.9574242143476,5.06137589729817,7.72613975082025,12.7446302169725,16.3088870891286,18.3424553546789,17.6672293764115,23.3082745145447,17.53764811293,37.0698823614528,0.621339313086926,0,4.78452947340732,6.12196414691261,3.50012139019286,4.64975364519832,2.53434188236167,1.87771581833206,1.5624526181274,0.734015410979976,0.241584120826006,0.288030006257865,1.58005560314089,5.47358081283443,2.2596410576262,1.42912905275575,1.43221356533985,0.79472541912506,0.360586348559907,0.590758108698309,0.403865799792591,0.609654453239999,0.604957110821043,0.877120926657772,0.288635524920988,0.701261413089414,27.2076460338254,15.7610026895586,28.7981479716417,46.5040387328497,29.9443870749895,5.06742683718191,14.6521299413812,92.3927713830774,2.00628841614145,0,0,0,0,0,0,0,0,0.453142408984205,0,2.49089634202024,5.98537310101547,6.65861062441123,9.48116196566347,3.5634237646757,2.5738091183002,4.88942801163553,3.29656091582231,5.13470735346904,5.55933865880354,3.8021894983536,6.22466926574051,5.52484894072306,4.67383612555546,4.307660171671,1.90517476513229,5.44656331940821,8.48800570040302,3.70877310722976,5.88795680537589,5.82877729055206,4.96932257246145,4.29185141905178,4.65108533223451,5.17601592284318,4.90764725771724,5.67076715905595,6.05060336307039,4.20992752922171,3.36685362994643,5.10130577933949,4.62971067165148,9.41231399290286,5.26785260032284,9.25951732709479,12.2407183189594,11.2287172053796,9.23945532407683,7.26895661861605,11.6913452133343,4.40548887678801
|short_description=p3@Sdc1
}}

Latest revision as of 23:09, 26 September 2015

Short description:p3@Sdc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sdc1_5end
Coexpression cluster:MCL_coexpression_mm9:2049
Association with transcript: 35bp_to_ENSMUST00000171158_5end
EntrezGene:Sdc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sdc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I317.24
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.24
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.60
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I28.62
Ileum epithelium, pool1.CNhs13199.10252-104B951.50
Ileum epithelium, pool2.CNhs13232.10253-104C129.49
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.60
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.04
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C740.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E741.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D244.76
Mouse Microglia, donor1.CNhs12629.11718-123C813.48
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D95.00
Mouse Schwann, donor2.CNhs12573.11746-123F96.73
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F736.14
Mouse hepatocyte, donor1.CNhs13078.11714-123C4122.39
Mouse hepatocyte, donor3.CNhs12615.11637-122C889.05
Mouse hepatocyte, donor6.CNhs13090.11822-124F4120.21
Mouse hepatocyte, donor8.CNhs13091.11824-124F660.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E322.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.26
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G175.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G276.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G380.38
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B624.32
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B213.14
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E221.56
forelimb, embryo E12.CNhs10600.359-14H212.86
forelimb, embryo E13.CNhs10589.384-1E218.30
forelimb, embryo E14.CNhs10577.413-26A822.58
forelimb, embryo E15.CNhs11007.437-20E729.47
forelimb, embryo E17.CNhs10598.1517-43C422.98
forelimb, embryo E18.CNhs11008.1520-43B527.37
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D310.67
intestine, embryo E18.CNhs10526.1289-20F77.42
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E97.41
intestine, neonate N06.CNhs11102.688-20B810.56
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E317.51
intestine, neonate N30.CNhs11131.1384-42G113.54
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B246.54
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F411.51
liver, neonate N03.CNhs11123.1345-25G229.65
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H242.80
liver, neonate N10.CNhs11115.751-24B960.22
liver, neonate N20.CNhs11220.823-25A352.79
liver, neonate N25.CNhs11198.1368-26H149.51
liver, neonate N30.CNhs11106.1382-42D195.04
lung, adult.CNhs10474.28-22B117.00
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A615.08
lung, embryo E18.CNhs10583.1287-20I625.71
lung, neonate N00.CNhs11224.640-42C633.56
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A310.19
lung, neonate N10.CNhs11219.750-23E611.64
lung, neonate N20.CNhs11109.822-18A49.83
lung, neonate N25.CNhs11119.1359-25C710.71
lung, neonate N30.CNhs11133.1394-42H212.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.39
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.72
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I77.52
ovary, embryo E18.CNhs11040.505-44H76.05
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G66.43
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I727.22
placenta, adult pregnant day17.CNhs10464.577-18G310.17
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C337.43
skin, neonate N00.CNhs11124.650-25G417.76
skin, neonate N03.CNhs11215.662-22H318.94
skin, neonate N06.CNhs11097.693-20I536.29
skin, neonate N10.CNhs11108.762-6C465.33
small intestine, neonate N16.CNhs11114.790-21I116.91
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G87.73
stomach, embryo E16.CNhs11022.459-17D412.74
stomach, embryo E17.CNhs11006.1035-18D516.31
stomach, embryo E18.CNhs10999.1286-20C618.34
stomach, neonate N03.CNhs11193.1340-24B817.67
stomach, neonate N07.CNhs11210.718-18A923.31
stomach, neonate N25.CNhs11104.1355-25E417.54
stomach, neonate N30.CNhs11134.1386-42I137.07
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I54.65
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B427.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.80
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G546.50
urinary bladder, adult.CNhs10481.879-12E429.94
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E514.65
vagina, adult.CNhs10502.89-27D592.39
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F99.26
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B311.23
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D111.69
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endodermal cell3.40e-0820
epithelial cell7.50e-0725

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.68e-12118
endoderm1.68e-12118
presumptive endoderm1.68e-12118
digestive system8.06e-12116
digestive tract8.06e-12116
primitive gut8.06e-12116
subdivision of digestive tract3.61e-11114
intestine5.44e-0831
gastrointestinal system1.88e-0747
digestive tract diverticulum2.51e-0723
sac2.51e-0723
liver4.24e-0722
epithelial sac4.24e-0722
digestive gland4.24e-0722
epithelium of foregut-midgut junction4.24e-0722
anatomical boundary4.24e-0722
hepatobiliary system4.24e-0722
foregut-midgut junction4.24e-0722
hepatic diverticulum4.24e-0722
liver primordium4.24e-0722
septum transversum4.24e-0722
liver bud4.24e-0722
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