FFCP PHASE1:Hg19::chr9:88896977..88897013,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:88896977..88897013,-
|short_description=p2@ISCA1
|description=CAGE_peak_2_at_ISCA1_5end
|association_with_transcript=9bp_to_ENST00000311534_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81689 | |EntrezGene=81689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28660 | |HGNC=28660 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TBE2 | |UniProt=Q5TBE2 | ||
|association_with_transcript=9bp_to_ENST00000311534_5end | |||
|cluster_id=chr9:88896977..88897013,- | |||
|description=CAGE_peak_2_at_ISCA1_5end | |||
|id=chr9:88896977..88897013,- | |||
|ontology_enrichment_celltype=CL:0002321!8.46e-12!248;CL:0000220!3.98e-11!246;CL:0000133!8.66e-11!59;CL:0000055!2.31e-09!180;CL:0000221!8.99e-09!71;CL:0002319!7.33e-08!25;CL:0000325!2.87e-07!39;CL:0000333!8.71e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.81e-08;25!CL:0000540;2.43e-07;6!CL:0000404;2.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.73e-13,59;CL:0000221,1.18e-10,72;CL:0002321,2.50e-10,250;CL:0000047,5.36e-09,8;CL:0000333,6.29e-09,41;CL:0002319,1.63e-08,25;CL:0000540,2.74e-07,6;CL:0000031,2.74e-07,6;CL:0000404,2.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.43e-07;6!CL:0000133;3.97e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.05e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;1.57e-07;31!UBERON:0000019;4.24e-07;19!UBERON:0000047;4.24e-07;19!UBERON:0004088;4.24e-07;19!UBERON:0010230;4.24e-07;19!UBERON:0007625;6.96e-07;11!UBERON:0000020;9.02e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,6.66e-07,11 | |||
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| ||
|short_description=p2@ISCA1 | |||
}} | }} |
Latest revision as of 02:34, 18 September 2015
Short description: | p2@ISCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ISCA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000311534_5end |
EntrezGene: | ISCA1 |
HGNC: | 28660 |
UniProt: | Q5TBE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.73e-13 | 59 |
ectodermal cell | 1.18e-10 | 72 |
embryonic cell | 2.50e-10 | 250 |
neuronal stem cell | 5.36e-09 | 8 |
migratory neural crest cell | 6.29e-09 | 41 |
neural cell | 1.63e-08 | 25 |
neuron | 2.74e-07 | 6 |
neuroblast | 2.74e-07 | 6 |
electrically signaling cell | 2.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 6.66e-07 | 11 |