FFCP PHASE1:Hg19::chr4:21546069..21546089,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30083 | |||
|TSSclassifier=strong | |||
|UniProt=A8K4N3,Q3YAB8,Q6PIL6 | |||
|association_with_transcript=189bp_to_ENST00000509207,NM_001035004,uc003gqg.1_5end | |||
|cluster_id=chr4:21546069..21546089,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_12_at_KCNIP4_5end | |||
|id=chr4:21546069..21546089,- | |||
|ontology_enrichment_celltype=CL:0002319!1.88e-19!25;CL:0000128!1.86e-16!7;CL:0000126!1.86e-16!7;CL:0000127!1.86e-16!7;CL:0002453!1.86e-16!7;CL:0000047!1.11e-15!8;CL:0002605!1.48e-14!3;CL:0000133!2.12e-10!59;CL:0000243!2.47e-09!15;CL:0000125!2.47e-09!15;CL:0000030!2.47e-09!15;CL:0000339!2.47e-09!15;CL:0000095!2.75e-08!17;CL:0000123!2.75e-08!17;CL:0000221!2.97e-08!71;CL:0000540!3.53e-08!6;CL:0000031!3.53e-08!6;CL:0000404!3.53e-08!6;CL:0002603!3.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.55e-33;6!CL:0000404;1.55e-33;6!CL:0002319;1.60e-20;25!CL:0000047;2.07e-12;2!CL:0002605;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.84e-44,8;CL:0000540,1.31e-33,6;CL:0000031,1.31e-33,6;CL:0000404,1.31e-33,6;CL:0002319,1.60e-20,25;CL:0000133,3.37e-09,59;CL:0002605,1.51e-08,3;CL:0000221,1.33e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.55e-33;6!UBERON:0004140;4.59e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.63e-30!86;UBERON:0001017!1.38e-29!82;UBERON:0000073!1.94e-29!94;UBERON:0001016!1.94e-29!94;UBERON:0002780!8.21e-22!41;UBERON:0001890!8.21e-22!41;UBERON:0006240!8.21e-22!41;UBERON:0003080!3.16e-21!42;UBERON:0001049!1.82e-19!57;UBERON:0005068!1.82e-19!57;UBERON:0006241!1.82e-19!57;UBERON:0007135!1.82e-19!57;UBERON:0003075!8.05e-19!86;UBERON:0007284!8.05e-19!86;UBERON:0002616!1.09e-18!59;UBERON:0003056!5.42e-18!61;UBERON:0002346!8.83e-18!90;UBERON:0000955!2.97e-17!69;UBERON:0006238!2.97e-17!69;UBERON:0001869!7.96e-15!32;UBERON:0002791!2.51e-14!33;UBERON:0004121!6.36e-14!169;UBERON:0002020!7.43e-14!34;UBERON:0003528!7.43e-14!34;UBERON:0001893!7.43e-14!34;UBERON:0000924!1.81e-13!173;UBERON:0006601!1.81e-13!173;UBERON:0003296!4.41e-12!4;UBERON:0010133!4.41e-12!4;UBERON:0001894!1.96e-11!7;UBERON:0006222!1.96e-11!7;UBERON:0001905!2.45e-11!2;UBERON:0002757!2.45e-11!2;UBERON:0010134!2.45e-11!2;UBERON:0002784!2.45e-11!2;UBERON:0005408!2.45e-11!2;UBERON:0001899!2.45e-11!2;UBERON:0000369!1.49e-10!4;UBERON:0002435!1.49e-10!4;UBERON:0000204!1.49e-10!4;UBERON:0010082!1.49e-10!4;UBERON:0000956!2.07e-10!25;UBERON:0000203!2.07e-10!25;UBERON:0002360!3.66e-10!2;UBERON:0000094!3.66e-10!2;UBERON:0007645!3.66e-10!2;UBERON:0000033!3.37e-09!123;UBERON:0007023!4.31e-09!115;UBERON:0000153!1.37e-08!129;UBERON:0007811!1.37e-08!129;UBERON:0005383!6.88e-07!3;UBERON:0005382!6.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.03e-45;2!UBERON:0002757;2.03e-45;2!UBERON:0010134;2.03e-45;2!UBERON:0005408;2.03e-45;2!UBERON:0001899;2.03e-45;2!UBERON:0003296;2.63e-23;4!UBERON:0010133;2.63e-23;4!UBERON:0002784;2.63e-23;4!UBERON:0001894;8.94e-14;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.04e-45,2;UBERON:0002757,2.04e-45,2;UBERON:0010134,2.04e-45,2;UBERON:0005408,2.04e-45,2;UBERON:0001899,2.04e-45,2;UBERON:0003296,2.63e-23,4;UBERON:0010133,2.63e-23,4;UBERON:0002784,2.63e-23,4;UBERON:0001894,8.94e-14,7;UBERON:0006222,8.94e-14,7;UBERON:0001017,6.20e-13,81;UBERON:0001016,1.18e-11,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,1.14494394852423,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,3.90419561572865,8.50617694055465,2.17771144934653,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2764859772478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65491985328316,0.314727528809989,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620060389503552,0,0.546974809018219,0,0,0,0,11.249738553444,78.6903909992048,0,0.91064876540519,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0.316027223465453,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |||
|short_description=p12@KCNIP4 | |||
}} |
Latest revision as of 08:01, 17 September 2015
Short description: | p12@KCNIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KCNIP4_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 189bp_to_ENST00000509207, NM_001035004, uc003gqg.1_5end |
EntrezGene: | KCNIP4 |
HGNC: | 30083 |
UniProt: | A8K4N3Q3YAB8Q6PIL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.84e-44 | 8 |
neuron | 1.31e-33 | 6 |
neuroblast | 1.31e-33 | 6 |
electrically signaling cell | 1.31e-33 | 6 |
neural cell | 1.60e-20 | 25 |
neurectodermal cell | 3.37e-09 | 59 |
astrocyte of the cerebral cortex | 1.51e-08 | 3 |
ectodermal cell | 1.33e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.04e-45 | 2 |
regional part of epithalamus | 2.04e-45 | 2 |
secretory circumventricular organ | 2.04e-45 | 2 |
circumventricular organ | 2.04e-45 | 2 |
epithalamus | 2.04e-45 | 2 |
gland of diencephalon | 2.63e-23 | 4 |
neuroendocrine gland | 2.63e-23 | 4 |
regional part of diencephalon | 2.63e-23 | 4 |
diencephalon | 8.94e-14 | 7 |
future diencephalon | 8.94e-14 | 7 |
central nervous system | 6.20e-13 | 81 |
nervous system | 1.18e-11 | 89 |