FFCP PHASE1:Mm9::chr15:58913432..58913444,-: Difference between revisions
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{{FFCP|EntrezGene=211401|HGNC=|UniProt=Q6ZQB7,G3X9H7,E9QMG6,Q8R1S4|association_with_transcript=136bp_to_ENSMUST00000036782,ENSMUST00000080371,ENSMUST00000110150,NM_001146180,NM_144800,uc007vty.2,uc007vtz.2,uc007vua.2_5end|description=CAGE_peak_6_at_Mtss1_5end|id=chr15:58913432..58913444,-|ontology_enrichment_celltype=CL:0000393!2.43e-13!39;CL:0000211!2.43e-13!39;CL:0000055!1.32e-12!50;CL:0000540!2.50e-12!33;CL:0000047!2.50e-12!33;CL:0000031!2.50e-12!33;CL:0000404!2.50e-12!33;CL:0000221!6.57e-11!44;CL:0000133!6.57e-11!44;CL:0002319!6.67e-11!43;CL:0000117!3.05e-09!23;CL:0000337!3.05e-09!23;CL:0002321!1.99e-08!70;CL:0000220!1.99e-08!70;CL:0000723!2.05e-07!91;CL:0000048!2.05e-07!91|ontology_enrichment_celltype_v019_2=CL:0002321,7.59e-18,70;CL:0000393,1.71e-15,39;CL:0000211,1.71e-15,39;CL:0002319,5.61e-15,43;CL:0000221,1.67e-14,44;CL:0000133,1.67e-14,44;CL:0000723,4.25e-12,91;CL:0000048,4.25e-12,91;CL:0000540,5.24e-12,33;CL:0000047,5.24e-12,33;CL:0000031,5.24e-12,33;CL:0000404,5.24e-12,33;CL:0000034,7.51e-11,97;CL:0000182,2.19e-10,5;CL:0000117,2.69e-09,23;CL:0000337,2.69e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!3.44e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.54e-09,22;UBERON:0007499,1.54e-09,22;UBERON:0006925,1.54e-09,22;UBERON:0009497,1.54e-09,22;UBERON:0000015,1.54e-09,22;UBERON:0002423,1.54e-09,22;UBERON:0006235,1.54e-09,22;UBERON:0008835,1.54e-09,22;UBERON:0003894,1.54e-09,22;UBERON:0004161,1.54e-09,22;UBERON:0008836,1.54e-09,22;UBERON:0000025,3.32e-09,114;UBERON:0001017,4.85e-09,73;UBERON:0009854,5.33e-09,23;UBERON:0009856,5.33e-09,23;UBERON:0001016,1.24e-08,75;UBERON:0005256,1.54e-08,45;UBERON:0004111,4.54e-08,122;UBERON:0002365,4.70e-08,25;UBERON:0002330,4.70e-08,25|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.503637815735669,0,0.516493293766305,0.281577444303333,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.611942816932982,0.666219523631325,0.607425802169478,0.699561878128147,0.788655413395594,1.50825876966313,2.97072756258621,0.0850432901510698,0.0992909512008853,0,0,0.22940928106717,0,0.86152399231815,0,0.760093677825496,0.252030129759931,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0.485510353031154,1.6366586336825,3.14268486780495,1.65192076945513,0,1.30815093828268,1.31811709640683,1.94429899074283,1.25987779462826,0,0.335565212115473,0,0.336093799142464,0,0.286533439938757,1.03134418455488,2.83243045203437,0.528990979272033,1.26766280701236,0.338844532069132,0,0.899899717281399,0,0.7104801149461,2.09720077362883,0,0.933206510776299,2.16009501330705,1.68259969081106,0.856952953211411,0.883474163806454,1.34739879136449,2.77951865952885,0.919218786610021,0,0.510749352340751,0.768032666281217,2.2420668914133,5.30628332893976,1.56274011167028,0.279182999001381,1.68828783009504,0.61119299110724,0.883885756421003,2.13557521198654,1.4911955666024,0.075726193333184,0,1.44932244350839,1.72084775396277,7.47968467078526,5.39703191637817,4.54843492213368,3.13618820968135,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0.649473123033642,0.253359865475099,0,1.1418387971906,0.258937883647172,0.148442139064825,1.38788261412909,0,1.15307748628029,0.150722640552623,0.705532242814229,0.251333182659351,1.48316980640624,0.144599356919912,0,0.161766849947409,0,0,0,1.75668478206928,1.25668024088073,0,0,0.599902730993408,0.381210681219194,0.149790639404823,0,0.753926112677186,0.173824320192276,0,0.62336413367868,0.162241263067758,0.203678727700633,0.622034853050465,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.340182495756639,0.12811372028485,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0.51469581422943,0,0,0.938104239924385,0.36012412292203,0.23674473558521,0.393528463494808,0.771335564436891,0.232533944750408,0.536546802799238,0.233530684734339,0.16455984991348,0.32833492815819,0.648550476366846,0.438599962275997,0.219550115291051,0.268412837520744,0,0.720332286654991,0.660837565967596,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.502670417600539,1.1937388322469,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.814605311381257,0.775809948670503,0.49095073923223,0.316182685621286,0.590440591918409,0.627994911365499,0.246794327843601,2.07516838961004,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,1.43768206527355,1.11642284300551,1.87222603868736,0.252578877947112,1.07638448113147,1.4473305640901,0,0,0.325929952884052,0.509235257325564,1.17345124144251,0.167506257441816,0.714130922658041,0.585400943573396,0,0.664394068946325,0.637819074629948,0.491589944147214,0.690739927463582,0.289298117163023,1.50791283939272,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.468846746368813,0,0.252470927204373,1.57754109708128,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,1.98153571552183,1.21443210502468,1.16902343164525,1.58115111178609,0,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.728341908464944,0.604647113929502,0.565815239267694,0,0.614870295887855,0,0.363533729477506,0,0,0,0,0,1.08036656418786,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.23467170806371,1.27099242518292,0,0,0.322928853391811,0.180938774784468,0.477489376012546,0.492422699235184,0,0.18542530201051,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.546776910884101,0.457556346413045,0.169978429993855,0.139951452323658,0.414599921413271,0.954670618015114,0,0,0.756037385752609,0.209088296014469,0.655087691238533,0,0.247960367176008,0,0.388844919875379,0,0.56369293868419,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0.358053391334963,0.39736270956253,0.360586348559907,0,0.201932899896295,0.15241361331,0.604957110821043,0.584747284438515,0.384847366561318,0.467507608726276,0,0,0.179427713218951,0,0.386379188064381,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.561849044819294,0.768301828858431,0.402048282689293,0.476293691283074,0.347652977834566,0.77163688185482,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.953744759789284,0.290692833264657,0.846984423737976,0.676916863133412,0.73171189149109,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.492522411877817,1.22769312950907,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p6@Mtss1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=211401 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q6ZQB7,G3X9H7,E9QMG6,Q8R1S4 | |||
|association_with_transcript=136bp_to_ENSMUST00000036782,ENSMUST00000080371,ENSMUST00000110150,NM_001146180,NM_144800,uc007vty.2,uc007vtz.2,uc007vua.2_5end | |||
|cluster_id=chr15:58913432..58913444,- | |||
|description=CAGE_peak_6_at_Mtss1_5end | |||
|id=chr15:58913432..58913444,- | |||
|ontology_enrichment_celltype=CL:0000393!2.43e-13!39;CL:0000211!2.43e-13!39;CL:0000055!1.32e-12!50;CL:0000540!2.50e-12!33;CL:0000047!2.50e-12!33;CL:0000031!2.50e-12!33;CL:0000404!2.50e-12!33;CL:0000221!6.57e-11!44;CL:0000133!6.57e-11!44;CL:0002319!6.67e-11!43;CL:0000117!3.05e-09!23;CL:0000337!3.05e-09!23;CL:0002321!1.99e-08!70;CL:0000220!1.99e-08!70;CL:0000723!2.05e-07!91;CL:0000048!2.05e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.59e-18,70;CL:0000393,1.71e-15,39;CL:0000211,1.71e-15,39;CL:0002319,5.61e-15,43;CL:0000221,1.67e-14,44;CL:0000133,1.67e-14,44;CL:0000723,4.25e-12,91;CL:0000048,4.25e-12,91;CL:0000540,5.24e-12,33;CL:0000047,5.24e-12,33;CL:0000031,5.24e-12,33;CL:0000404,5.24e-12,33;CL:0000034,7.51e-11,97;CL:0000182,2.19e-10,5;CL:0000117,2.69e-09,23;CL:0000337,2.69e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.44e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.54e-09,22;UBERON:0007499,1.54e-09,22;UBERON:0006925,1.54e-09,22;UBERON:0009497,1.54e-09,22;UBERON:0000015,1.54e-09,22;UBERON:0002423,1.54e-09,22;UBERON:0006235,1.54e-09,22;UBERON:0008835,1.54e-09,22;UBERON:0003894,1.54e-09,22;UBERON:0004161,1.54e-09,22;UBERON:0008836,1.54e-09,22;UBERON:0000025,3.32e-09,114;UBERON:0001017,4.85e-09,73;UBERON:0009854,5.33e-09,23;UBERON:0009856,5.33e-09,23;UBERON:0001016,1.24e-08,75;UBERON:0005256,1.54e-08,45;UBERON:0004111,4.54e-08,122;UBERON:0002365,4.70e-08,25;UBERON:0002330,4.70e-08,25 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.503637815735669,0,0.516493293766305,0.281577444303333,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.611942816932982,0.666219523631325,0.607425802169478,0.699561878128147,0.788655413395594,1.50825876966313,2.97072756258621,0.0850432901510698,0.0992909512008853,0,0,0.22940928106717,0,0.86152399231815,0,0.760093677825496,0.252030129759931,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0.485510353031154,1.6366586336825,3.14268486780495,1.65192076945513,0,1.30815093828268,1.31811709640683,1.94429899074283,1.25987779462826,0,0.335565212115473,0,0.336093799142464,0,0.286533439938757,1.03134418455488,2.83243045203437,0.528990979272033,1.26766280701236,0.338844532069132,0,0.899899717281399,0,0.7104801149461,2.09720077362883,0,0.933206510776299,2.16009501330705,1.68259969081106,0.856952953211411,0.883474163806454,1.34739879136449,2.77951865952885,0.919218786610021,0,0.510749352340751,0.768032666281217,2.2420668914133,5.30628332893976,1.56274011167028,0.279182999001381,1.68828783009504,0.61119299110724,0.883885756421003,2.13557521198654,1.4911955666024,0.075726193333184,0,1.44932244350839,1.72084775396277,7.47968467078526,5.39703191637817,4.54843492213368,3.13618820968135,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0.649473123033642,0.253359865475099,0,1.1418387971906,0.258937883647172,0.148442139064825,1.38788261412909,0,1.15307748628029,0.150722640552623,0.705532242814229,0.251333182659351,1.48316980640624,0.144599356919912,0,0.161766849947409,0,0,0,1.75668478206928,1.25668024088073,0,0,0.599902730993408,0.381210681219194,0.149790639404823,0,0.753926112677186,0.173824320192276,0,0.62336413367868,0.162241263067758,0.203678727700633,0.622034853050465,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.340182495756639,0.12811372028485,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0.51469581422943,0,0,0.938104239924385,0.36012412292203,0.23674473558521,0.393528463494808,0.771335564436891,0.232533944750408,0.536546802799238,0.233530684734339,0.16455984991348,0.32833492815819,0.648550476366846,0.438599962275997,0.219550115291051,0.268412837520744,0,0.720332286654991,0.660837565967596,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.502670417600539,1.1937388322469,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.814605311381257,0.775809948670503,0.49095073923223,0.316182685621286,0.590440591918409,0.627994911365499,0.246794327843601,2.07516838961004,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,1.43768206527355,1.11642284300551,1.87222603868736,0.252578877947112,1.07638448113147,1.4473305640901,0,0,0.325929952884052,0.509235257325564,1.17345124144251,0.167506257441816,0.714130922658041,0.585400943573396,0,0.664394068946325,0.637819074629948,0.491589944147214,0.690739927463582,0.289298117163023,1.50791283939272,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.468846746368813,0,0.252470927204373,1.57754109708128,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,1.98153571552183,1.21443210502468,1.16902343164525,1.58115111178609,0,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.728341908464944,0.604647113929502,0.565815239267694,0,0.614870295887855,0,0.363533729477506,0,0,0,0,0,1.08036656418786,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.23467170806371,1.27099242518292,0,0,0.322928853391811,0.180938774784468,0.477489376012546,0.492422699235184,0,0.18542530201051,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.546776910884101,0.457556346413045,0.169978429993855,0.139951452323658,0.414599921413271,0.954670618015114,0,0,0.756037385752609,0.209088296014469,0.655087691238533,0,0.247960367176008,0,0.388844919875379,0,0.56369293868419,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0.358053391334963,0.39736270956253,0.360586348559907,0,0.201932899896295,0.15241361331,0.604957110821043,0.584747284438515,0.384847366561318,0.467507608726276,0,0,0.179427713218951,0,0.386379188064381,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.561849044819294,0.768301828858431,0.402048282689293,0.476293691283074,0.347652977834566,0.77163688185482,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.953744759789284,0.290692833264657,0.846984423737976,0.676916863133412,0.73171189149109,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.492522411877817,1.22769312950907,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p6@Mtss1 | |||
}} |
Latest revision as of 20:45, 26 September 2015
Short description: | p6@Mtss1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Mtss1_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_ENSMUST00000036782, ENSMUST00000080371, ENSMUST00000110150, NM_001146180, NM_144800, uc007vty.2, uc007vtz.2, uc007vua.2_5end |
EntrezGene: | Mtss1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.59e-18 | 70 |
electrically responsive cell | 1.71e-15 | 39 |
electrically active cell | 1.71e-15 | 39 |
neural cell | 5.61e-15 | 43 |
ectodermal cell | 1.67e-14 | 44 |
neurectodermal cell | 1.67e-14 | 44 |
somatic stem cell | 4.25e-12 | 91 |
multi fate stem cell | 4.25e-12 | 91 |
neuron | 5.24e-12 | 33 |
neuronal stem cell | 5.24e-12 | 33 |
neuroblast | 5.24e-12 | 33 |
electrically signaling cell | 5.24e-12 | 33 |
stem cell | 7.51e-11 | 97 |
hepatocyte | 2.19e-10 | 5 |
CNS neuron (sensu Vertebrata) | 2.69e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.69e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
liver | 1.54e-09 | 22 |
epithelial sac | 1.54e-09 | 22 |
digestive gland | 1.54e-09 | 22 |
epithelium of foregut-midgut junction | 1.54e-09 | 22 |
anatomical boundary | 1.54e-09 | 22 |
hepatobiliary system | 1.54e-09 | 22 |
foregut-midgut junction | 1.54e-09 | 22 |
hepatic diverticulum | 1.54e-09 | 22 |
liver primordium | 1.54e-09 | 22 |
septum transversum | 1.54e-09 | 22 |
liver bud | 1.54e-09 | 22 |
tube | 3.32e-09 | 114 |
central nervous system | 4.85e-09 | 73 |
digestive tract diverticulum | 5.33e-09 | 23 |
sac | 5.33e-09 | 23 |
nervous system | 1.24e-08 | 75 |
trunk mesenchyme | 1.54e-08 | 45 |
anatomical conduit | 4.54e-08 | 122 |
exocrine gland | 4.70e-08 | 25 |
exocrine system | 4.70e-08 | 25 |