FFCP PHASE1:Hg19::chr4:48018616..48018632,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1259 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2148 | |||
|TSSclassifier=strong | |||
|UniProt=Q08124 | |||
|association_with_transcript=-6bp_to_uc003gxv.1_5end | |||
|cluster_id=chr4:48018616..48018632,- | |||
|coexpression_cluster_id=C4420 | |||
|description=CAGE_peak_3_at_CNGA1_5end | |||
|id=chr4:48018616..48018632,- | |||
|ontology_enrichment_celltype=CL:0000223!1.34e-08!59;CL:0000066!3.09e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.86e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.12e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.04e-10!14;DOID:305!1.37e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.13e-14!169;UBERON:0000925!1.13e-14!169;UBERON:0006595!1.13e-14!169;UBERON:0001007!4.63e-13!155;UBERON:0001555!4.63e-13!155;UBERON:0007026!4.63e-13!155;UBERON:0004921!1.62e-11!129;UBERON:0004185!1.62e-11!129;UBERON:0000161!3.46e-11!35;UBERON:0000344!2.54e-08!12;UBERON:0000077!3.43e-08!130;UBERON:0000166!3.68e-08!21;UBERON:0001046!2.60e-07!19;UBERON:0000165!3.48e-07!28;UBERON:0000930!3.48e-07!28;UBERON:0003929!5.96e-07!54;UBERON:0000922!7.54e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;7.17e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.22e-08,118;UBERON:0004119,1.72e-07,160;UBERON:0000925,1.72e-07,160;UBERON:0006595,1.72e-07,160;UBERON:0000305,7.86e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0.575384784644301,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0.741568885568859,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.633152558322899,0.662045904066094,1.14734648299525,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0.853815942907168,0.265059536642971,0.464775771478074,0.518305275076852,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,6.33775174109154,0,1.77236972004421,0,0.737930631258681,0,0.219500570817251,0,0.301586917234893,0.555530670951178,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,1.01289087829486,0,0,0,0,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,4.84292754744295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.382838137483752,0.30347334256665,0,0,0,1.54016790088044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,1.32687795048244,0,0,0,1.01455188481352,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0,0,3.67160823029439,0,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,4.15750553165694,2.76444631889309,0,0,0.111308705022906,0,0.211125408127993,0,0.552567831062295,0.503865495708552,0,0.123084805461069,0,1.07842021376792,0.179021174675609,0,0.887790650732402,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.697118721393016,1.00035336054936,0,0,0,1.08647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0.424059214301822,0,0.995261931078505,0.619202951523374,4.888241159469,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,2.08271686002157,2.25382514053069,0.609414446062818,3.4945333648406,0.343972064943233,0,0,0,2.42472541221049,0,0,0,0,0,1.36885967914362,0,0,0,0,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.134366944973453,0,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0.482259445395058,0.275078873194468,0,0,0,0,0,0.788057072991982,0.944182586429966,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,2.34483573884932,2.65013777824443,0,0,0,2.81926008926669,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,7.87176412701035,0,0,0,0.438568099157414,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,0.419638523158333,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.588886311006154,0.235939446695481,0.550285795565037,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,0.739280431085226,0,0,0,0,0,1.09651553371436,0,0,0.127762427639595,0,0,0,0.227662191351298,7.09618961301111,0,0.171488009437418,0,0,0.118193840883968,1.00108261702862,0.706437835654626,0,3.92381028639305,0.913158720509496,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,2.76503864725637,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,2.4285549652957,0,0,0,0,0,0.150962843566674,1.46630900405095,1.74847648403166,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.357107877211315,0.705789743431384,0,0,0.458729283404541,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0.327796715891087,0,0.305966489225945,0,0,0.250707539292375,0.303114792872958,0,0,0,0.852935927603924,0.23806443146374,0,0.0620747142958579,0,0,0,1.08858373948481,0.342233301085281,0.80822463617505,0.573777643141411,0,0.162806537221949,0,0,0.538951212639521,2.34640942403454,0,0.406896178315738,1.99727032255654,0.201273793591026,0 | |||
|short_description=p3@CNGA1 | |||
}} |
Latest revision as of 22:21, 17 September 2015
Short description: | p3@CNGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNGA1_5end |
Coexpression cluster: | C4420_colon_Hepatocyte_placenta_mesothelioma_liver_lung_amniotic |
Association with transcript: | -6bp_to_uc003gxv.1_5end |
EntrezGene: | CNGA1 |
HGNC: | 2148 |
UniProt: | Q08124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.12e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 6.22e-08 | 118 |
endoderm-derived structure | 1.72e-07 | 160 |
endoderm | 1.72e-07 | 160 |
presumptive endoderm | 1.72e-07 | 160 |
amnion | 7.86e-07 | 7 |