FFCP PHASE1:Mm9::chr17:80706736..80706753,+: Difference between revisions
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{{FFCP|EntrezGene=381112|HGNC=|MCL_coexpression_id=30|UniProt=Q8BW86|association_with_transcript=0bp_to_ENSMUST00000068175,NM_001145452,uc012axs.1_5end|description=CAGE_peak_1_at_Arhgef33_5end|id=chr17:80706736..80706753,+|ontology_enrichment_celltype=CL:0000120!2.34e-10!3|ontology_enrichment_celltype_v019_2=CL:0000120,5.97e-33,3;CL:0000117,5.20e-12,23;CL:0000337,5.20e-12,23;CL:0000540,1.97e-08,33;CL:0000047,1.97e-08,33;CL:0000031,1.97e-08,33;CL:0000404,1.97e-08,33;CL:0000393,3.71e-07,39;CL:0000211,3.71e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.17e-07!9;UBERON:0000019!1.17e-07!9;UBERON:0000047!1.17e-07!9;UBERON:0004088!1.17e-07!9;UBERON:0002104!1.17e-07!9;UBERON:0001456!1.17e-07!9;UBERON:0003072!1.17e-07!9;UBERON:0003071!1.17e-07!9;UBERON:0004128!1.17e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.95e-12,4;UBERON:0002680,2.95e-12,4;UBERON:0001895,2.95e-12,4;UBERON:0010092,2.95e-12,4;UBERON:0006215,2.95e-12,4;UBERON:0004733,1.75e-08,6;UBERON:0004732,1.75e-08,6;UBERON:0002028,1.75e-08,6;UBERON:0007277,1.75e-08,6;UBERON:0001017,2.53e-07,73;UBERON:0001016,4.00e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0.46081959976873,0,0,0,2.79182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.9438586800092,60.1112048554616,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.340182495756639,0.384341160854549,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p1@Arhgef33}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381112 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BW86 | |||
|association_with_transcript=0bp_to_ENSMUST00000068175,NM_001145452,uc012axs.1_5end | |||
|cluster_id=chr17:80706736..80706753,+ | |||
|description=CAGE_peak_1_at_Arhgef33_5end | |||
|id=chr17:80706736..80706753,+ | |||
|ontology_enrichment_celltype=CL:0000120!2.34e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,5.97e-33,3;CL:0000117,5.20e-12,23;CL:0000337,5.20e-12,23;CL:0000540,1.97e-08,33;CL:0000047,1.97e-08,33;CL:0000031,1.97e-08,33;CL:0000404,1.97e-08,33;CL:0000393,3.71e-07,39;CL:0000211,3.71e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.17e-07!9;UBERON:0000019!1.17e-07!9;UBERON:0000047!1.17e-07!9;UBERON:0004088!1.17e-07!9;UBERON:0002104!1.17e-07!9;UBERON:0001456!1.17e-07!9;UBERON:0003072!1.17e-07!9;UBERON:0003071!1.17e-07!9;UBERON:0004128!1.17e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.95e-12,4;UBERON:0002680,2.95e-12,4;UBERON:0001895,2.95e-12,4;UBERON:0010092,2.95e-12,4;UBERON:0006215,2.95e-12,4;UBERON:0004733,1.75e-08,6;UBERON:0004732,1.75e-08,6;UBERON:0002028,1.75e-08,6;UBERON:0007277,1.75e-08,6;UBERON:0001017,2.53e-07,73;UBERON:0001016,4.00e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0.46081959976873,0,0,0,2.79182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.9438586800092,60.1112048554616,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.340182495756639,0.384341160854549,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p1@Arhgef33 | |||
}} |
Latest revision as of 22:10, 26 September 2015
Short description: | p1@Arhgef33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arhgef33_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000068175, NM_001145452, uc012axs.1_5end |
EntrezGene: | Arhgef33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 5.97e-33 | 3 |
CNS neuron (sensu Vertebrata) | 5.20e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.20e-12 | 23 |
neuron | 1.97e-08 | 33 |
neuronal stem cell | 1.97e-08 | 33 |
neuroblast | 1.97e-08 | 33 |
electrically signaling cell | 1.97e-08 | 33 |
electrically responsive cell | 3.71e-07 | 39 |
electrically active cell | 3.71e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.95e-12 | 4 |
regional part of metencephalon | 2.95e-12 | 4 |
metencephalon | 2.95e-12 | 4 |
future metencephalon | 2.95e-12 | 4 |
rhombic lip | 2.95e-12 | 4 |
segmental subdivision of hindbrain | 1.75e-08 | 6 |
segmental subdivision of nervous system | 1.75e-08 | 6 |
hindbrain | 1.75e-08 | 6 |
presumptive hindbrain | 1.75e-08 | 6 |
central nervous system | 2.53e-07 | 73 |
nervous system | 4.00e-07 | 75 |