FFCP PHASE1:Hg19::chr5:38445616..38445634,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133584 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26810 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000508868_5end | |||
|cluster_id=chr5:38445616..38445634,+ | |||
|description=CAGE_peak_3_at_EGFLAM_5end | |||
|id=chr5:38445616..38445634,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.61e-07!180;CL:0000680!5.96e-07!57;CL:0000056!5.96e-07!57;CL:0000355!5.96e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.32e-09;13!CL:0000327;7.04e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.84e-07,15;CL:0000327,7.44e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.17e-10!312;UBERON:0000475!5.85e-10!365;UBERON:0007023!1.39e-09!115;UBERON:0000483!3.42e-09!309;UBERON:0001134!1.02e-08!61;UBERON:0002036!1.02e-08!61;UBERON:0003082!1.02e-08!61;UBERON:0004290!1.45e-08!70;UBERON:0002385!1.76e-08!63;UBERON:0001015!1.76e-08!63;UBERON:0000383!1.76e-08!63;UBERON:0000481!3.86e-08!347;UBERON:0000914!2.23e-07!83;UBERON:0002329!2.23e-07!83;UBERON:0003077!2.23e-07!83;UBERON:0003059!2.23e-07!83;UBERON:0007282!2.23e-07!83;UBERON:0009618!2.23e-07!83;UBERON:0007285!2.23e-07!83;UBERON:0000486!5.26e-07!82;UBERON:0000479!7.46e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.78e-08;16!UBERON:0002036;4.78e-08;16!UBERON:0002385;9.90e-07;31!UBERON:0001015;9.90e-07;31!UBERON:0000383;9.90e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,7.11e-08,62;UBERON:0002036,7.11e-08,62;UBERON:0003082,7.11e-08,62;UBERON:0002385,2.08e-07,64;UBERON:0001015,2.08e-07,64;UBERON:0000383,2.08e-07,64;UBERON:0002329,2.46e-07,71;UBERON:0003059,2.46e-07,71;UBERON:0007282,2.46e-07,71;UBERON:0004290,2.46e-07,71;UBERON:0009618,2.46e-07,71;UBERON:0003077,3.94e-07,72;UBERON:0007285,3.94e-07,72;UBERON:0005256,4.73e-07,122;UBERON:0007524,6.21e-07,73;UBERON:0003104,6.24e-07,160;UBERON:0009142,6.24e-07,160 | |||
|phase1_expression=0.908391896352783,2.14100523890983,2.11431606143957,0,1.78784437770915,0,2.53299878168311,2.52687949370732,2.35067065379855,0,0,0.218441372130172,0,1.48519623552056,1.98838425436749,0,0,0,0,0.738726348460727,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,3.2529523714611,0.50133791063589,2.60723734129483,4.7717156823066,3.89307896242109,0.189069634328136,0.665188192387692,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0.550236083880135,1.25396979922086,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,4.05217637326655,1.98613771219828,0.573673241497627,1.06400514659507,0,0,0,0.311211035399766,0.538842688278752,0,5.75158225050739,5.18558332031999,0,3.43376084513353,0,0.448346041655403,0,0.161872944368132,0.280901613404497,0,0.368502951935304,0,0,0,4.55080680969013,2.87447256726495,0.336672227908132,0,0,0,0,0,0.680593098960126,0,0.427114777637135,0,0,0,0.515281080091258,1.11670113798954,0,0,0,0.0920498986422993,0,0,0.302256294682921,0.508681776931463,0,0.545492241181669,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,1.6462960453256,1.47008711385542,0,0,1.18157981336281,0,0,0.514703430895577,0.109750285408626,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0,3.76145795351963,2.90633938513962,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,2.01835951821649,3.48768055066624,3.59357600522655,0.258543431515556,0,3.381211010224,0,0,0.514414748524284,0,0,0.57191197463259,1.08524321078289,1.64648067356154,3.25736184293735,1.06617584622764,0,1.80863626235752,0.871533458600294,2.59929777073348,0,0,0,0,0,4.27910715122155,1.15825045334063,6.36976599906189,4.47652408099739,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.981531933753119,3.00102312635806,1.08506009479894,0.207970861530807,0,0,0,0.902838299183157,0,0,0,0.553107505625109,0.260650843404249,0.391602314925481,0.686286847621712,0,0,0,0.606255142892519,0,0.30239029332968,0.992431231275107,0.306923946576125,0.841980283299221,1.79394808957981,0,2.0911009748669,0,3.54682295746108,1.42049380250502,3.28508624055237,2.59627214591811,5.57809816607804,0,1.20303882181971,0,2.87036120411517,6.55528204824181,8.1297137274843,0,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0.915694648183434,0.247528499761764,0,0,9.64103579064957,0.580024309752732,2.46477787383431,2.6095624703442,1.10269257987624,0.966782203814463,0.870100163485371,0.681813019328807,0.979352392114111,0.165284915360978,0,0,0,0.929691098594572,0,0.6970372701606,2.7723022215848,2.12922412126809,0,0.37064843820784,3.00562262158182,3.72158369359667,0,0.190630193923825,0.255897791311334,0.855877976067841,4.45484547096312,0,1.07923474549989,3.56898138656871,2.23843564456804,2.42618977887979,0,0,0,4.6305563029944,4.22600587027022,2.72999822815972,0.565621727814851,1.13008116620243,1.10273068709225,2.65375590096488,1.75380354101505,0,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,1.34060455107157,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24873719888493,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,0.828851746593443,0,0,0,0,0,0,0,1.479651084554,0,1.11136990144637,0,0.371072392647405,0,0,0.874599999961957,9.42499448065232,0,0,0,0,7.87332456134787,0,0.885741385813839,0.60298219312704,0,0.221158519862449,0,1.75508317723178,0,5.15867853830832,0.846452843541768,0,0,0.359030577639089,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.404406797884062,3.21031058919516,0,0,0,0,0.394584402849391,1.20990716048664,1.22429104652196,4.54943373325113,0,0,0,0,0,0,0,0,0,1.17590876897253,0,0.873633341210151,1.71986032471617,0,0,0,0.678923115418936,0,0.225980740780532,0,0.993573058514948,0.126621591911757,0,1.20238230377301,0,6.5937171162103,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0.273810757783986,0,0,0,1.11712960508902,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.201550417460179,1.08089965062721,0,0,0,0,1.47641222272123,0,0,0.136203406111576,0,0,0,0,0,0,0,1.65491985328316,0.524545881349981,0,15.9565732006232,0,1.42939065274673,0,0,4.3439968140297,7.77799342081141,5.22539776175055,0,0,1.70388021785422,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0.320362237703084,0.78602152549833,0.414239055347196,2.97699613087171,0,0,0,3.80812462358632,8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| |||
|short_description=p3@EGFLAM | |||
}} |
Latest revision as of 20:14, 17 September 2015
Short description: | p3@EGFLAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EGFLAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508868_5end |
EntrezGene: | EGFLAM |
HGNC: | 26810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.84e-07 | 15 |
extracellular matrix secreting cell | 7.44e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 7.11e-08 | 62 |
striated muscle tissue | 7.11e-08 | 62 |
myotome | 7.11e-08 | 62 |
muscle tissue | 2.08e-07 | 64 |
musculature | 2.08e-07 | 64 |
musculature of body | 2.08e-07 | 64 |
somite | 2.46e-07 | 71 |
presomitic mesoderm | 2.46e-07 | 71 |
presumptive segmental plate | 2.46e-07 | 71 |
dermomyotome | 2.46e-07 | 71 |
trunk paraxial mesoderm | 2.46e-07 | 71 |
paraxial mesoderm | 3.94e-07 | 72 |
presumptive paraxial mesoderm | 3.94e-07 | 72 |
trunk mesenchyme | 4.73e-07 | 122 |
dense mesenchyme tissue | 6.21e-07 | 73 |
mesenchyme | 6.24e-07 | 160 |
entire embryonic mesenchyme | 6.24e-07 | 160 |