FFCP PHASE1:Hg19::chr5:38445641..38445658,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133584 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26810 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000397210_5end | |||
|cluster_id=chr5:38445641..38445658,+ | |||
|description=CAGE_peak_1_at_EGFLAM_5end | |||
|id=chr5:38445641..38445658,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.53e-10!180;CL:0000136!2.94e-09!15;CL:0000680!1.26e-08!57;CL:0000056!1.26e-08!57;CL:0000355!1.26e-08!57;CL:0000187!2.07e-07!54;CL:0002334!8.99e-07!12;CL:0000183!9.50e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.99e-11;13!CL:0002334;4.80e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.65e-11,15;CL:0002334,2.33e-08,12;CL:0000680,8.38e-08,58;CL:0000056,8.38e-08,58;CL:0000355,8.38e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-14!115;UBERON:0000119!5.38e-13!312;UBERON:0000483!5.84e-12!309;UBERON:0000475!6.37e-11!365;UBERON:0002385!6.56e-11!63;UBERON:0001015!6.56e-11!63;UBERON:0000383!6.56e-11!63;UBERON:0004290!1.10e-10!70;UBERON:0001134!1.37e-10!61;UBERON:0002036!1.37e-10!61;UBERON:0003082!1.37e-10!61;UBERON:0000481!2.51e-10!347;UBERON:0000486!6.74e-10!82;UBERON:0000914!3.95e-09!83;UBERON:0002329!3.95e-09!83;UBERON:0003077!3.95e-09!83;UBERON:0003059!3.95e-09!83;UBERON:0007282!3.95e-09!83;UBERON:0009618!3.95e-09!83;UBERON:0007285!3.95e-09!83;UBERON:0000477!4.69e-09!286;UBERON:0000468!9.23e-09!659;UBERON:0000922!7.39e-08!612;UBERON:0002050!1.08e-07!605;UBERON:0005423!1.08e-07!605;UBERON:0000479!1.39e-07!787;UBERON:0000923!1.46e-07!604;UBERON:0005291!1.46e-07!604;UBERON:0006598!1.46e-07!604;UBERON:0002532!1.46e-07!604;UBERON:0000467!4.83e-07!625;UBERON:0000480!6.48e-07!626;UBERON:0004111!6.91e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.75e-09;16!UBERON:0002036;3.75e-09;16!UBERON:0002385;8.85e-08;31!UBERON:0001015;8.85e-08;31!UBERON:0000383;8.85e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,4.84e-10,64;UBERON:0001015,4.84e-10,64;UBERON:0000383,4.84e-10,64;UBERON:0001134,4.96e-10,62;UBERON:0002036,4.96e-10,62;UBERON:0003082,4.96e-10,62;UBERON:0007023,4.44e-09,114;UBERON:0002329,9.27e-09,71;UBERON:0003059,9.27e-09,71;UBERON:0007282,9.27e-09,71;UBERON:0004290,9.27e-09,71;UBERON:0009618,9.27e-09,71;UBERON:0003077,1.77e-08,72;UBERON:0007285,1.77e-08,72;UBERON:0007524,3.29e-08,73;UBERON:0000486,8.76e-08,83;UBERON:0005256,9.35e-08,122;UBERON:0007503,5.51e-07,78;UBERON:0003104,5.54e-07,160;UBERON:0009142,5.54e-07,160;UBERON:0002100,7.03e-07,199 | |||
|phase1_expression=3.08853244759946,3.8538094300377,6.20199378022273,4.00293193412522,4.02264984984559,2.61701557230111,5.06599756336621,6.94891860769514,4.70134130759709,0.737201809504527,0,0,0.263766978228454,2.59909341216098,3.64537113300707,0,0.602694528023977,0,0.487932798790507,1.72369481307503,1.02000345622126,0.626909442956176,0.85870796139317,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,1.34140171940727,1.66221330396589,5.78302643815306,6.01605492763067,6.37324683427624,8.74814541756209,0.973269740605272,0.661743720148475,0.886917589850256,0.263504357079378,2.22664428346111,0,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,1.46296476575767,0,0,0.33472061276467,0,0,0,0,0,0.625098097988558,0.22452937262617,0.225222960966644,1.53316637465883,0,0,0,0,0,0.993943903390637,5.31848148991235,5.82600395578163,1.14734648299525,3.19201543978521,1.12135520028461,0,0,1.24484414159907,0.808264032418128,1.14423332179421,27.2443369760877,16.13292588544,0,9.05264222807929,0.570471821544449,0.597794722207204,0.117434498643765,0.161872944368132,0.421352420106746,0,0.122834317311768,0,0,0,10.0117749813183,5.03032699271367,1.17835279767846,0.500474079487857,0,0,0,0,1.24775401476023,0.538168907066586,0.85422955527427,0,0,0.103052529238439,0.515281080091258,0.744467425326359,0,0,0.252433774244115,0,0,0,0,2.03472710772585,0.57978255948989,2.72746120590835,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,2.76269842704961,0.464367928031979,1.44375896333917,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,0,1.6462960453256,1.47008711385542,1.26755034821831,0,1.18157981336281,0,0,1.02940686179115,0.658501712451753,1.1240175325762,0.301586917234893,0.370353780634118,0,0,0,0.579652024875384,0,0,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0,6.08997954379368,8.13775027839093,4.60059214998253,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,5.83081638595876,10.0270815831654,6.67378400970645,0.258543431515556,0,4.22651376278,0,0,1.80045161983499,0,0.266422179016099,0.57191197463259,0,0,5.86325131728723,1.77695974371273,0,7.83742380354924,3.48613383440118,7.59794732983634,0,0,0,0,0,1.42636905040718,3.04040744001916,8.6300055471161,6.26713371339634,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,2.57652132610194,5.00170521059677,3.52644530809656,0,0,0,0,0,0,0,0,0.737476674166813,0.260650843404249,0,2.05886054286514,0,0,0,0.606255142892519,0,0.604780586659361,3.47350930946288,1.68808170616869,2.80660094433074,4.22859192543813,1.53512174720011,6.91671860917512,4.45254199334973,3.70103265126373,3.55123450626254,3.53146770859379,3.63478100428535,5.11325665223821,0.120859449591622,2.20557117333613,0,6.08516575272416,16.3882051206045,14.2925612305772,0,0.15403067420883,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.9273691048295,1.19040304263846,1.40266149865,0,0,25.7094287750655,0.870036464629098,5.08360436478326,3.37708084397485,1.37836572484531,1.28904293841928,1.88521702088497,1.02271952899321,2.04773681987496,1.32227932288782,0,0.127612712494584,0.10115778085555,0,0,0.6970372701606,4.62050370264133,6.91997839412128,1.73986598415015,2.03856641014312,5.72499546967965,11.9090678195094,0.632758849437452,1.33441135746677,1.02359116524534,1.71175595213568,7.95508119814842,2.35484592059769,2.69808686374972,5.21620356498504,7.18655654308687,5.45892700247953,0,0,0,6.58026422004468,2.11300293513511,6.14249601335936,0.424216295861138,0,0,5.30751180192976,3.5076070820301,0.578775534266688,1.9676842561399,0.608731130888112,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,1.31717957183961,0,0.349934720244983,0.865999014529609,1.34060455107157,0,1.03558180854457,0.43050537267123,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,3.67560323971548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.236850644277,0,0,0,0,0,0,0,0.281338832821026,0,0,0,7.37217556528958,0.552567831062295,0,0,0,0,0,0,0,3.35387579165574,0,3.33410970433911,0,0.649376687132959,0,0,1.92411999991631,20.2999881121742,0,0,0,0,21.8703460037441,0.347249989866585,3.54296554325536,2.65312164975897,0,1.54810963903714,0,3.07139556015562,0,13.3846794507459,3.30886111566327,0,0.23056390438806,2.06442582142476,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,1.99052386215701,2.29989667708682,0,0,0,0,0.606610196826093,4.01288823649394,0.234264445725339,0,0,0,3.15667522279512,2.41981432097328,0.91821828489147,13.0164354034685,0,0,0,0,0,0,0,0,0,0.587954384486266,0,4.36816670605075,5.67553907156335,0,0,0,2.71569246167574,0,2.03382666702479,0,1.58971689362392,0.189932387867636,0,1.44285876452761,1.06726497369676,17.5832456432275,0,0,0,0,0,0,0,0,0,0.866851769704557,0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| |||
|short_description=p1@EGFLAM | |||
}} |
Latest revision as of 20:14, 17 September 2015
Short description: | p1@EGFLAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EGFLAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397210_5end |
EntrezGene: | EGFLAM |
HGNC: | 26810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.65e-11 | 15 |
preadipocyte | 2.33e-08 | 12 |
muscle precursor cell | 8.38e-08 | 58 |
myoblast | 8.38e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.38e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 4.84e-10 | 64 |
musculature | 4.84e-10 | 64 |
musculature of body | 4.84e-10 | 64 |
skeletal muscle tissue | 4.96e-10 | 62 |
striated muscle tissue | 4.96e-10 | 62 |
myotome | 4.96e-10 | 62 |
adult organism | 4.44e-09 | 114 |
somite | 9.27e-09 | 71 |
presomitic mesoderm | 9.27e-09 | 71 |
presumptive segmental plate | 9.27e-09 | 71 |
dermomyotome | 9.27e-09 | 71 |
trunk paraxial mesoderm | 9.27e-09 | 71 |
paraxial mesoderm | 1.77e-08 | 72 |
presumptive paraxial mesoderm | 1.77e-08 | 72 |
dense mesenchyme tissue | 3.29e-08 | 73 |
multilaminar epithelium | 8.76e-08 | 83 |
trunk mesenchyme | 9.35e-08 | 122 |
epithelial vesicle | 5.51e-07 | 78 |
mesenchyme | 5.54e-07 | 160 |
entire embryonic mesenchyme | 5.54e-07 | 160 |
trunk | 7.03e-07 | 199 |