FFCP PHASE1:Hg19::chr5:82937248..82937251,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1404 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2380 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=54bp_to_M63579_5end | |||
|cluster_id=chr5:82937248..82937251,- | |||
|description=CAGE_peak_9_at_HAPLN1_5end | |||
|id=chr5:82937248..82937251,- | |||
|ontology_enrichment_celltype=CL:0000055!1.83e-12!180;CL:0002573!3.43e-11!2;CL:0002580!2.33e-10!3;CL:0000057!9.96e-10!75;CL:0002588!6.34e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002548;3.11e-27;6!CL:0002494;5.85e-23;16!CL:0002573;1.71e-14;2!CL:0002592;1.71e-14;3!CL:0000138;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,4.06e-27,6;CL:0002494,6.08e-23,16;CL:0002592,1.40e-14,3;CL:0002573,1.60e-14,2;CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;5.88e-17;22!UBERON:0007100;4.96e-15;25!UBERON:0003498;1.71e-14;3!UBERON:0005985;1.71e-14;3!UBERON:0001621;1.71e-14;3!UBERON:0003103;8.78e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,1.31e-15,24;UBERON:0005498,1.31e-15,24;UBERON:0004140,1.31e-15,24;UBERON:0009881,1.31e-15,24;UBERON:0004141,1.31e-15,24;UBERON:0003084,1.31e-15,24;UBERON:0007005,1.31e-15,24;UBERON:0004139,1.31e-15,24;UBERON:0004291,1.31e-15,24;UBERON:0001621,1.40e-14,3;UBERON:0007100,5.66e-14,27;UBERON:0003498,2.74e-09,5;UBERON:0005985,2.74e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,4.86634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0,0,1.12135520028461,1.06748995729705,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0.358779271377724,0,0,0.600182192168805,0.206105058476878,0.257640540045629,0,0,0,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.491245205065606,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,1.41998400876678,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@HAPLN1 | |||
}} |
Latest revision as of 01:07, 19 September 2015
Short description: | p9@HAPLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HAPLN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 54bp_to_M63579_5end |
EntrezGene: | HAPLN1 |
HGNC: | 2380 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 4.06e-27 | 6 |
cardiocyte | 6.08e-23 | 16 |
smooth muscle cell of the coronary artery | 1.40e-14 | 3 |
Schwann cell | 1.60e-14 | 2 |
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
heart | 1.31e-15 | 24 |
primitive heart tube | 1.31e-15 | 24 |
primary heart field | 1.31e-15 | 24 |
anterior lateral plate mesoderm | 1.31e-15 | 24 |
heart tube | 1.31e-15 | 24 |
heart primordium | 1.31e-15 | 24 |
cardiac mesoderm | 1.31e-15 | 24 |
cardiogenic plate | 1.31e-15 | 24 |
heart rudiment | 1.31e-15 | 24 |
coronary artery | 1.40e-14 | 3 |
primary circulatory organ | 5.66e-14 | 27 |
heart blood vessel | 2.74e-09 | 5 |
coronary vessel | 2.74e-09 | 5 |