FFCP PHASE1:Hg19::chr6:108279263..108279284,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21082 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENST00000460009_5end | |||
|cluster_id=chr6:108279263..108279284,- | |||
|coexpression_cluster_id=C4541 | |||
|description=CAGE_peak_4_at_SEC63_5end | |||
|id=chr6:108279263..108279284,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009497;8.62e-07;13 | |||
|ontology_enrichment_disease=DOID:0050687!9.49e-11!143;DOID:162!2.20e-10!235;DOID:14566!1.74e-09!239;DOID:305!2.13e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.95e-10,143;DOID:162,7.27e-09,235;DOID:305,1.45e-08,106;DOID:14566,5.93e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.34e-09!155;UBERON:0001555!1.34e-09!155;UBERON:0007026!1.34e-09!155;UBERON:0004119!3.28e-08!169;UBERON:0000925!3.28e-08!169;UBERON:0006595!3.28e-08!169;UBERON:0002530!3.46e-08!59;UBERON:0003929!5.53e-08!54;UBERON:0004921!6.14e-08!129;UBERON:0004185!6.14e-08!129;UBERON:0002365!4.53e-07!31;UBERON:0002330!4.53e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;3.77e-07;31!UBERON:0002330;3.77e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.20e-10,145;UBERON:0001555,2.20e-10,145;UBERON:0007026,2.20e-10,145;UBERON:0004119,6.13e-09,160;UBERON:0000925,6.13e-09,160;UBERON:0006595,6.13e-09,160;UBERON:0004921,1.00e-08,118;UBERON:0002530,3.25e-08,59;UBERON:0003929,3.47e-08,54;UBERON:0002365,4.47e-07,31;UBERON:0002330,4.47e-07,31 | |||
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| |||
|short_description=p4@SEC63 | |||
}} |
Latest revision as of 17:00, 19 September 2015
Short description: | p4@SEC63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEC63_5end |
Coexpression cluster: | C4541_parotid_salivary_Smooth_submaxillary_Mast_Hepatocyte_liver |
Association with transcript: | -17bp_to_ENST00000460009_5end |
EntrezGene: | SEC63 |
HGNC: | 21082 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 2.20e-10 | 145 |
digestive tract | 2.20e-10 | 145 |
primitive gut | 2.20e-10 | 145 |
endoderm-derived structure | 6.13e-09 | 160 |
endoderm | 6.13e-09 | 160 |
presumptive endoderm | 6.13e-09 | 160 |
subdivision of digestive tract | 1.00e-08 | 118 |
gland | 3.25e-08 | 59 |
gut epithelium | 3.47e-08 | 54 |
exocrine gland | 4.47e-07 | 31 |
exocrine system | 4.47e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.95e-10 | 143 |
cancer | 7.27e-09 | 235 |
carcinoma | 1.45e-08 | 106 |
disease of cellular proliferation | 5.93e-08 | 239 |