FFCP PHASE1:Hg19::chrY:6778723..6778746,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrY:6778723..6778746,+
|short_description=p1@TBL1Y
|description=CAGE_peak_1_at_TBL1Y_5end
|association_with_transcript=0bp_to_ENST00000346432,ENST00000355162,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90665 | |EntrezGene=90665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18502 | |HGNC=18502 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQ87,F5H6C0 | |UniProt=Q9BQ87,F5H6C0 | ||
|association_with_transcript=0bp_to_ENST00000346432,ENST00000355162,ENST00000383032,ENST00000540077,NM_033284,NM_134258,NM_134259,uc004frb.2,uc004frc.2,uc004frd.2,uc011nap.1_5end | |||
|cluster_id=chrY:6778723..6778746,+ | |||
|coexpression_cluster_id=C2964 | |||
|description=CAGE_peak_1_at_TBL1Y_5end | |||
|id=chrY:6778723..6778746,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000575;4.85e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.47e-11,58;CL:0000575,3.21e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.06e-12;11!UBERON:0009497;1.38e-10;13!UBERON:0003104;1.17e-07;31!CL:0000223;8.55e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!6.11e-11!126;UBERON:0005177!2.24e-09!107;UBERON:0004119!2.77e-09!169;UBERON:0000925!2.77e-09!169;UBERON:0006595!2.77e-09!169;UBERON:0007023!5.15e-09!115;UBERON:0001041!3.40e-08!98;UBERON:0000464!5.59e-08!104;UBERON:0001007!1.29e-07!155;UBERON:0001555!1.29e-07!155;UBERON:0007026!1.29e-07!155;UBERON:0000077!2.27e-07!130;UBERON:0004921!2.89e-07!129;UBERON:0004185!2.89e-07!129;UBERON:0000481!3.96e-07!347;UBERON:0001004!5.48e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.07e-07;19!UBERON:0006925;4.07e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.50e-10,101;UBERON:0003929,3.84e-08,54;UBERON:0004119,6.44e-08,160;UBERON:0000925,6.44e-08,160;UBERON:0006595,6.44e-08,160;UBERON:0005911,8.59e-08,82;UBERON:0000949,1.64e-07,45;UBERON:0002530,3.35e-07,59;UBERON:0002107,3.87e-07,19;UBERON:0006925,3.87e-07,19;UBERON:0008836,3.87e-07,19;UBERON:0005172,8.91e-07,54;UBERON:0005173,8.91e-07,54 | |||
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| ||
|short_description=p1@TBL1Y | |||
}} | }} |
Latest revision as of 18:09, 16 September 2015
Short description: | p1@TBL1Y |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBL1Y_5end |
Coexpression cluster: | C2964_gastrointestinal_medulloblastoma_oral_thyroid_hepatoblastoma_Hepatocyte_Small |
Association with transcript: | 0bp_to_ENST00000346432, ENST00000355162, ENST00000383032, ENST00000540077, NM_033284, NM_134258, NM_134259, uc004frb.2, uc004frc.2, uc004frd.2, uc011nap.1_5end |
EntrezGene: | TBL1Y |
HGNC: | 18502 |
UniProt: | Q9BQ87F5H6C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.47e-11 | 58 |
corneal epithelial cell | 3.21e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.50e-10 | 101 |
gut epithelium | 3.84e-08 | 54 |
endoderm-derived structure | 6.44e-08 | 160 |
endoderm | 6.44e-08 | 160 |
presumptive endoderm | 6.44e-08 | 160 |
endo-epithelium | 8.59e-08 | 82 |
endocrine system | 1.64e-07 | 45 |
gland | 3.35e-07 | 59 |
liver | 3.87e-07 | 19 |
digestive gland | 3.87e-07 | 19 |
liver bud | 3.87e-07 | 19 |
abdomen element | 8.91e-07 | 54 |
abdominal segment element | 8.91e-07 | 54 |