FFCP PHASE1:Mm9::chr2:124436328..124436349,+: Difference between revisions
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{{FFCP|EntrezGene=214968|HGNC=|UniProt=A2AW73|association_with_transcript=0bp_to_ENSMUST00000103240_5end|description=CAGE_peak_1_at_Sema6d_5end|id=chr2:124436328..124436349,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.40e-09!114;UBERON:0000468!4.38e-09!333;UBERON:0004111!1.29e-07!122;UBERON:0000922!1.47e-07!328;UBERON:0007100!1.80e-07!18;UBERON:0000948!1.80e-07!18;UBERON:0005498!1.80e-07!18;UBERON:0004140!1.80e-07!18;UBERON:0009881!1.80e-07!18;UBERON:0004141!1.80e-07!18;UBERON:0003084!1.80e-07!18;UBERON:0007005!1.80e-07!18;UBERON:0004139!1.80e-07!18;UBERON:0004291!1.80e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.34e-09,114;UBERON:0000160,8.20e-08,31;UBERON:0004111,1.36e-07,122;UBERON:0007100,1.75e-07,18;UBERON:0000948,1.75e-07,18;UBERON:0005498,1.75e-07,18;UBERON:0004140,1.75e-07,18;UBERON:0009881,1.75e-07,18;UBERON:0004141,1.75e-07,18;UBERON:0003084,1.75e-07,18;UBERON:0007005,1.75e-07,18;UBERON:0004139,1.75e-07,18;UBERON:0004291,1.75e-07,18;UBERON:0000922,5.84e-07,320|phase1_expression=6.24580503708696,47.1116800313137,39.5849338268896,32.9685990324445,36.064492556137,17.4594442788365,18.4553986070465,0,0,0,0,0,0,0,12.9912807108108,8.90891176515234,9.09430441566591,3.3123527362615,6.17014951225825,8.91218268775863,7.48380953329414,0,0,19.3590831580022,16.5174682368362,27.563134277521,21.1073378117947,29.088616412595,16.9120843316173,14.3657173963161,17.5167103417691,0,0,0,0.866554859253824,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0,0,0,5.47673941043627,1.30815093828268,5.05278220289285,5.44403717407994,3.3596741190087,12.9377307928474,0.335565212115473,0.725362142011344,0,30.8711323243136,78.5101625432193,17.532851137433,4.24864567805155,6.87688273053643,10.1413024560989,3.04960078862219,3.55717918444456,0.899899717281399,0.988866362566974,0.7104801149461,10.4860038681442,35.348084089583,11.0947885170071,17.8207838597832,7.36137364729837,33.7068161596488,22.7494597180162,6.85948475603743,7.85932862349538,19.3035945188104,5.50579404996943,19.1531007127782,22.733766921924,5.01167893374737,8.41686321142169,4.16730696445408,11.4465029590566,19.6966913511088,16.1966142643419,23.5702868378934,26.6235043094322,16.4031512326265,7.79979791331796,15.6433129421046,51.306014500197,50.7650087419018,0,0.539703191637817,7.14754059192436,3.13618820968135,6.17955448579708,0,0,0,7.46470124816407,0,5.09610479413291,7.11066703153331,0.216491041011214,0,0,7.65031994117702,19.9382170408322,6.53145411885229,7.11289839741157,6.39377504455497,8.76338889573022,9.3448037142626,6.82014501387088,5.78066320116507,8.89901883843746,6.79616977523585,8.84610551949874,11.9707468961083,10.3795513676385,11.1521308221101,16.775258509631,24.8863677459815,25.5524982312415,10.2182822083437,0.11981512450592,0,0,14.9790639404823,9.60751265919116,6.78533501409468,6.25767552692195,7.41574826257959,20.1554403222773,14.2772311499627,5.90668310331835,13.8091737377203,0.505445516867349,2.94618598241064,4.55421550369463,3.21862946206862,4.50155324513373,7.68594570962147,4.76255494059295,4.22775276940004,7.77724313845749,8.2785078636485,4.52692785158969,3.02569728268511,4.22282697993477,5.91828477554452,7.50727572909114,11.1440693287093,9.05441400194951,14.3304672109315,0,0,0,18.4341937556597,14.7751417788091,19.0865785148676,20.3600472603281,18.495837784256,15.2724441758504,20.2304531932855,20.9253253091703,10.3921154706781,19.5826221397042,25.6101243963389,20.1050647673722,15.7895986419359,21.735461413814,14.4942932261202,10.5144974282064,5.9684675179985,23.4597335918497,26.1806060996909,8.53153002140936,7.19933682767359,9.27845721519072,15.7313149206207,21.1259141652627,18.2616601068057,23.7264530772256,25.6930369369457,29.6575546384318,26.0632978373908,26.9050440224386,23.3693046250098,20.3169766882213,16.5287256801125,4.55202962287396,5.02693455482807,7.88954149711563,10.1825663922657,6.0125271021964,5.54072977133517,14.8605862242005,8.85660887877613,7.22194148070324,3.94870924549762,6.81841042300442,9.84386123724955,9.43483176543374,5.8464149220062,7.1001042485976,11.576503668116,12.9859184408524,11.2201493605816,13.943629502653,18.1210532704134,23.0029130443767,29.7712758134803,22.4667124642484,19.1959947239805,14.7105879087968,12.5435315554475,24.5721742921584,6.63219941196697,11.5705133273838,12.5611363473639,14.7854856421756,29.8161138246432,20.4717531161972,14.8301572371927,31.5270288212382,39.1992500678332,39.2258730897418,25.5626770956551,28.8383919716046,30.810249477862,1.50791283939272,1.63171705145613,5.4094070032094,7.72622889653251,25.8486449880345,21.332526959781,0,7.32165688892682,1.89304931649754,1.95219372148319,4.52389135238878,4.06246956519338,6.68396022247182,8.77537245445381,1.61924280669958,6.42962887404886,3.55759000151871,14.4594592389813,8.51640511249612,9.97167380536629,8.1443479676788,5.93892442701128,1.32745138339963,5.58395463156457,7.55808892411878,7.35559811048003,12.697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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214968 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2AW73 | |||
|association_with_transcript=0bp_to_ENSMUST00000103240_5end | |||
|cluster_id=chr2:124436328..124436349,+ | |||
|description=CAGE_peak_1_at_Sema6d_5end | |||
|id=chr2:124436328..124436349,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.40e-09!114;UBERON:0000468!4.38e-09!333;UBERON:0004111!1.29e-07!122;UBERON:0000922!1.47e-07!328;UBERON:0007100!1.80e-07!18;UBERON:0000948!1.80e-07!18;UBERON:0005498!1.80e-07!18;UBERON:0004140!1.80e-07!18;UBERON:0009881!1.80e-07!18;UBERON:0004141!1.80e-07!18;UBERON:0003084!1.80e-07!18;UBERON:0007005!1.80e-07!18;UBERON:0004139!1.80e-07!18;UBERON:0004291!1.80e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.34e-09,114;UBERON:0000160,8.20e-08,31;UBERON:0004111,1.36e-07,122;UBERON:0007100,1.75e-07,18;UBERON:0000948,1.75e-07,18;UBERON:0005498,1.75e-07,18;UBERON:0004140,1.75e-07,18;UBERON:0009881,1.75e-07,18;UBERON:0004141,1.75e-07,18;UBERON:0003084,1.75e-07,18;UBERON:0007005,1.75e-07,18;UBERON:0004139,1.75e-07,18;UBERON:0004291,1.75e-07,18;UBERON:0000922,5.84e-07,320 | |||
|phase1_expression=6.24580503708696,47.1116800313137,39.5849338268896,32.9685990324445,36.064492556137,17.4594442788365,18.4553986070465,0,0,0,0,0,0,0,12.9912807108108,8.90891176515234,9.09430441566591,3.3123527362615,6.17014951225825,8.91218268775863,7.48380953329414,0,0,19.3590831580022,16.5174682368362,27.563134277521,21.1073378117947,29.088616412595,16.9120843316173,14.3657173963161,17.5167103417691,0,0,0,0.866554859253824,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0,0,0,5.47673941043627,1.30815093828268,5.05278220289285,5.44403717407994,3.3596741190087,12.9377307928474,0.335565212115473,0.725362142011344,0,30.8711323243136,78.5101625432193,17.532851137433,4.24864567805155,6.87688273053643,10.1413024560989,3.04960078862219,3.55717918444456,0.899899717281399,0.988866362566974,0.7104801149461,10.4860038681442,35.348084089583,11.0947885170071,17.8207838597832,7.36137364729837,33.7068161596488,22.7494597180162,6.85948475603743,7.85932862349538,19.3035945188104,5.50579404996943,19.1531007127782,22.733766921924,5.01167893374737,8.41686321142169,4.16730696445408,11.4465029590566,19.6966913511088,16.1966142643419,23.5702868378934,26.6235043094322,16.4031512326265,7.79979791331796,15.6433129421046,51.306014500197,50.7650087419018,0,0.539703191637817,7.14754059192436,3.13618820968135,6.17955448579708,0,0,0,7.46470124816407,0,5.09610479413291,7.11066703153331,0.216491041011214,0,0,7.65031994117702,19.9382170408322,6.53145411885229,7.11289839741157,6.39377504455497,8.76338889573022,9.3448037142626,6.82014501387088,5.78066320116507,8.89901883843746,6.79616977523585,8.84610551949874,11.9707468961083,10.3795513676385,11.1521308221101,16.775258509631,24.8863677459815,25.5524982312415,10.2182822083437,0.11981512450592,0,0,14.9790639404823,9.60751265919116,6.78533501409468,6.25767552692195,7.41574826257959,20.1554403222773,14.2772311499627,5.90668310331835,13.8091737377203,0.505445516867349,2.94618598241064,4.55421550369463,3.21862946206862,4.50155324513373,7.68594570962147,4.76255494059295,4.22775276940004,7.77724313845749,8.2785078636485,4.52692785158969,3.02569728268511,4.22282697993477,5.91828477554452,7.50727572909114,11.1440693287093,9.05441400194951,14.3304672109315,0,0,0,18.4341937556597,14.7751417788091,19.0865785148676,20.3600472603281,18.495837784256,15.2724441758504,20.2304531932855,20.9253253091703,10.3921154706781,19.5826221397042,25.6101243963389,20.1050647673722,15.7895986419359,21.735461413814,14.4942932261202,10.5144974282064,5.9684675179985,23.4597335918497,26.1806060996909,8.53153002140936,7.19933682767359,9.27845721519072,15.7313149206207,21.1259141652627,18.2616601068057,23.7264530772256,25.6930369369457,29.6575546384318,26.0632978373908,26.9050440224386,23.3693046250098,20.3169766882213,16.5287256801125,4.55202962287396,5.02693455482807,7.88954149711563,10.1825663922657,6.0125271021964,5.54072977133517,14.8605862242005,8.85660887877613,7.22194148070324,3.94870924549762,6.81841042300442,9.84386123724955,9.43483176543374,5.8464149220062,7.1001042485976,11.576503668116,12.9859184408524,11.2201493605816,13.943629502653,18.1210532704134,23.0029130443767,29.7712758134803,22.4667124642484,19.1959947239805,14.7105879087968,12.5435315554475,24.5721742921584,6.63219941196697,11.5705133273838,12.5611363473639,14.7854856421756,29.8161138246432,20.4717531161972,14.8301572371927,31.5270288212382,39.1992500678332,39.2258730897418,25.5626770956551,28.8383919716046,30.810249477862,1.50791283939272,1.63171705145613,5.4094070032094,7.72622889653251,25.8486449880345,21.332526959781,0,7.32165688892682,1.89304931649754,1.95219372148319,4.52389135238878,4.06246956519338,6.68396022247182,8.77537245445381,1.61924280669958,6.42962887404886,3.55759000151871,14.4594592389813,8.51640511249612,9.97167380536629,8.1443479676788,5.93892442701128,1.32745138339963,5.58395463156457,7.55808892411878,7.35559811048003,12.6979813938732,11.0676653259814,13.6966995379157,11.6330793432802,7.84294232446387,4.10847785316561,3.16255825724996,4.12542172992747,4.08527526904546,8.64293251350289,6.98536892426874,8.78781843629528,10.6404140185364,10.167022603318,9.05019613311665,7.30715877875038,47.6383567369332,18.0057260234247,0.882113592219848,5.27636009412736,5.9741837877485,7.05661221659424,5.72987251215055,4.92422699235184,23.3184669303881,34.3036808719443,16.5744754373917,9.70018279427146,11.6672552242918,8.85331747922048,9.84198439591381,9.37990510146743,0.339956859987711,0.279902904647316,0.138199973804424,0.954670618015114,6.32671987162271,10.9792512248498,7.56037385752609,5.01811910434725,7.64268973111622,6.06889558731693,7.60411792673091,5.23511883968059,17.8868663142674,4.97071450469541,0,14.8021380583539,12.0784698033681,10.8892665472667,8.78286799648571,10.8131920314098,7.51086327332825,6.77062801188541,2.83120229949419,0.483168241652012,0.864090018773596,4.10814456816632,9.32535990334755,11.1954943309662,8.31493267057888,6.98204113103178,6.15912199821921,4.80781798079875,2.51072196196781,3.73575864808146,2.66723823292499,2.72230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| |||
|short_description=p1@Sema6d | |||
}} |
Latest revision as of 15:36, 25 September 2015
Short description: | p1@Sema6d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sema6d_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000103240_5end |
EntrezGene: | Sema6d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 1.34e-09 | 114 |
intestine | 8.20e-08 | 31 |
anatomical conduit | 1.36e-07 | 122 |
primary circulatory organ | 1.75e-07 | 18 |
heart | 1.75e-07 | 18 |
primitive heart tube | 1.75e-07 | 18 |
primary heart field | 1.75e-07 | 18 |
anterior lateral plate mesoderm | 1.75e-07 | 18 |
heart tube | 1.75e-07 | 18 |
heart primordium | 1.75e-07 | 18 |
cardiac mesoderm | 1.75e-07 | 18 |
cardiogenic plate | 1.75e-07 | 18 |
heart rudiment | 1.75e-07 | 18 |
embryo | 5.84e-07 | 320 |