FFCP PHASE1:Hg19::chr7:142511881..142511883,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:142511881..142511883,+ | |||
|coexpression_cluster_id=C1121 | |||
|description=CAGE_peak_at_chr7:142511881..142511883,+ | |||
|id=chr7:142511881..142511883,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.93e-41!53;CL:0000051!1.93e-41!53;CL:0000838!3.31e-40!52;CL:0000084!6.19e-23!25;CL:0000827!6.19e-23!25;CL:0002087!1.27e-20!119;CL:0000738!3.72e-18!140;CL:0000988!5.12e-18!182;CL:0002031!7.45e-18!124;CL:0000037!3.50e-17!172;CL:0000566!3.50e-17!172;CL:0000791!1.67e-16!18;CL:0000789!1.67e-16!18;CL:0002420!1.67e-16!18;CL:0002419!1.67e-16!18;CL:0000790!1.67e-16!18;CL:0002032!7.42e-15!165;CL:0000837!7.42e-15!165;CL:0000945!2.56e-14!24;CL:0000826!2.56e-14!24;CL:0000236!5.62e-12!14;CL:0000080!1.22e-10!6;CL:0000625!2.90e-09!11;CL:0000624!1.03e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.98e-19;25!CL:0000791;7.21e-18;18!CL:0000789;7.21e-18;18!CL:0002419;7.21e-18;18!CL:0000542;1.41e-15;53!CL:0000623;2.10e-13;3!CL:0000226;6.13e-13;3!CL:0000842;6.13e-13;3!CL:0000624;5.67e-12;6!CL:0000236;7.91e-11;13!CL:0000625;1.68e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.28e-28,52;CL:0000542,2.61e-27,53;CL:0000051,2.61e-27,53;CL:0000084,5.90e-19,25;CL:0000827,5.90e-19,25;CL:0000791,5.84e-18,18;CL:0000789,5.84e-18,18;CL:0002420,5.84e-18,18;CL:0002419,5.84e-18,18;CL:0000790,5.84e-18,18;CL:0002087,3.55e-15,115;CL:0000623,1.77e-13,3;CL:0000825,1.77e-13,3;CL:0000738,2.46e-13,136;CL:0000226,5.54e-13,3;CL:0000842,5.54e-13,3;CL:0000988,5.20e-12,177;CL:0000624,6.01e-12,6;CL:0002031,2.00e-10,120;CL:0000236,6.14e-10,14;CL:0000037,1.00e-09,168;CL:0000625,1.33e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.21e-18;18!CL:0000051;1.41e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.39e-12!15;UBERON:0000179!9.39e-12!15;UBERON:0000463!9.39e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.59e-16;15!UBERON:0000179;3.59e-16;15!UBERON:0000463;3.59e-16;15!UBERON:0002390;7.84e-11;32!UBERON:0002370;2.67e-10;2!UBERON:0005058;2.67e-10;2!UBERON:0009113;2.67e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.85e-16,15;UBERON:0000179,2.85e-16,15;UBERON:0000463,2.85e-16,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.472264687882075,0,0.383829398097213,0,0,0,0,0,0.284338464974843,0,0.553995408531877,0.802177789880567,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.70692089026603,2.00197993518006,0.574752439954483,1.32208974556972,0.954053754535364,1.1384259382189,2.93618594685469,1.14681968437569,0,0.560508562981536,0,4.91774425284583,5.50215067848831,3.49522548299166,0.83593247695339,0.977766799900771,0.946895611469467,11.6896037044747,0.779873198196215,1.17842362989935,2.43687284041983,3.79125409271022,1.40900451698243,2.08094956095805,1.97325485524411,3.03985019564433,0.869409257205157,0.741432815810302,3.47803076516627,2.09071047609954,0.453237370790265,0,1.37450978193052,2.02415753615602,1.59282707162048,0,0.950452044448374,0.903450714466637,0.895906278080929,0,1.4206635122641,0,3.22570789159572,2.94184215361858,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7755977777567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,1.57624608161542,3.01878604803324,2.43851768931522,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,1.50999940573032,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0.229723400206959,1.01489521846434,0,0,0.476463550915578,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0.557409525377156,0,10.3867091288685,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0.780103689942349,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0.638002319463839,0,0,4.08773192782946,0,0,0.225595660617181,0,0.671286347903371,0,0,0,0,0,0,0,0,0,2.37216902944498,1.97702302314405,1.56632924258183,0,0,0,0.182454789215666,0,0,0,2.41981432097328,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0.720273989940749,0,0,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0.667388411352415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41095188908457,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,3.57096647195611,5.10252387704448,13.3460635736094,0,0,0,0,0,0.202056159043763,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,2.21401172950129,0 | |||
|short_description=p@chr7:142511881..142511883,+ | |||
}} |
Latest revision as of 07:00, 31 July 2015
Short description: | p@chr7:142511881..142511883, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:142511881..142511883, + |
Coexpression cluster: | C1121_Hodgkin_CD4_acute_CD8_thymus_Natural_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.28e-28 | 52 |
lymphocyte | 2.61e-27 | 53 |
common lymphoid progenitor | 2.61e-27 | 53 |
T cell | 5.90e-19 | 25 |
pro-T cell | 5.90e-19 | 25 |
mature alpha-beta T cell | 5.84e-18 | 18 |
alpha-beta T cell | 5.84e-18 | 18 |
immature T cell | 5.84e-18 | 18 |
mature T cell | 5.84e-18 | 18 |
immature alpha-beta T cell | 5.84e-18 | 18 |
nongranular leukocyte | 3.55e-15 | 115 |
natural killer cell | 1.77e-13 | 3 |
pro-NK cell | 1.77e-13 | 3 |
leukocyte | 2.46e-13 | 136 |
single nucleate cell | 5.54e-13 | 3 |
mononuclear cell | 5.54e-13 | 3 |
hematopoietic cell | 5.20e-12 | 177 |
CD4-positive, alpha-beta T cell | 6.01e-12 | 6 |
hematopoietic lineage restricted progenitor cell | 2.00e-10 | 120 |
B cell | 6.14e-10 | 14 |
hematopoietic stem cell | 1.00e-09 | 168 |
CD8-positive, alpha-beta T cell | 1.33e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 2.85e-16 | 15 |
haemolymphatic fluid | 2.85e-16 | 15 |
organism substance | 2.85e-16 | 15 |