FFCP PHASE1:Mm9::chr3:116510985..116511054,-: Difference between revisions
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{{FFCP|EntrezGene=77559|HGNC=|MCL_coexpression_id=35|UniProt=|association_with_transcript=0bp_to_ENSMUST00000159742_5end|description=CAGE_peak_1_at_Agl_5end|id=chr3:116510985..116511054,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.82e-12!47;UBERON:0005256!3.83e-09!47;UBERON:0007100!2.89e-08!18;UBERON:0000948!2.89e-08!18;UBERON:0005498!2.89e-08!18;UBERON:0004140!2.89e-08!18;UBERON:0009881!2.89e-08!18;UBERON:0004141!2.89e-08!18;UBERON:0003084!2.89e-08!18;UBERON:0007005!2.89e-08!18;UBERON:0004139!2.89e-08!18;UBERON:0004291!2.89e-08!18;UBERON:0004111!3.45e-08!122;UBERON:0004535!8.14e-08!23;UBERON:0001009!8.14e-08!23;UBERON:0003103!1.53e-07!43;UBERON:0000025!8.48e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.82e-12,47;UBERON:0003104,2.41e-12,61;UBERON:0009142,2.41e-12,61;UBERON:0005256,1.43e-09,45;UBERON:0007100,2.89e-08,18;UBERON:0000948,2.89e-08,18;UBERON:0005498,2.89e-08,18;UBERON:0004140,2.89e-08,18;UBERON:0009881,2.89e-08,18;UBERON:0004141,2.89e-08,18;UBERON:0003084,2.89e-08,18;UBERON:0007005,2.89e-08,18;UBERON:0004139,2.89e-08,18;UBERON:0004291,2.89e-08,18;UBERON:0004111,3.58e-08,122;UBERON:0004535,8.13e-08,23;UBERON:0001009,8.13e-08,23;UBERON:0003103,1.52e-07,43;UBERON:0000025,8.78e-07,114|phase1_expression=7.68714466103011,3.83872948403297,0,6.0492842261366,7.01254021924886,1.51091344720701,2.80335168714631,0.903863264091034,0.140788722151667,0.468129052643987,0.171217968225505,0.159544317990673,0.684802919724823,0.262261207256992,2.33176833270964,1.21485160433896,1.39912375625629,3.94327706697797,4.38766187538364,1.69755860719212,10.2051948181284,5.65958421845046,2.08959831311148,3.67982572424835,2.2940928106717,1.72269589234506,2.15380998079537,1.939241094173,3.04037471130198,5.04060259519861,1.33038306393183,7.62036808151557,9.22597181376855,0,1.44425809875637,1.49611180822643,0.816677425049476,67.3835925486421,40.6294379152376,58.6346593250654,57.6466858270394,62.840184616177,68.4569597773927,10.0717454380462,8.41428529121971,12.664725899156,3.9119567217402,11.1192829754028,9.66619204031676,13.026803237977,9.51907667052465,5.75010257459886,2.34895648480831,0,4.7053131879945,9.51859913333004,17.1920063963254,15.9858348606007,2.22548106945558,1.5869729378161,2.53532561402472,1.69422266034566,0.889294796111139,2.6996991518442,1.97773272513395,3.5524005747305,4.79360176829448,4.99483796918021,2.48855069540346,1.62007125998029,1.47227472945967,11.9973413449598,9.05561017901615,2.69479758272899,2.01275489138296,0.919218786610021,12.1127469099328,20.6853487698004,14.7462271925994,1.84640802822271,4.02545631850602,1.56274011167028,16.7509799400829,13.5063026407603,17.4190002465564,12.374400589894,12.9558229527184,5.40558392893372,3.55913108665965,6.8014404096107,9.27566363845369,18.9293252935905,6.79971333707751,40.4777393728363,57.1803247353949,53.7632264516803,100.558204814334,12.4414135481982,9.87186817490901,10.9535268098205,9.29566570526091,10.2661181931454,0,0,4.32982082022428,3.04031838570118,2.52762222507392,30.2587281255509,5.69663344023778,36.5167662099469,8.50078101154066,19.1813251336649,20.0635482612771,26.3764620967089,27.2805800554835,34.1813128416717,17.7980376768749,82.4216334443496,55.7304647728421,55.4860295319613,95.8452190118108,69.822036451472,22.3670113461747,16.3957246326466,19.2690970268379,9.19645398750929,3.11519323715393,4.19931911695385,2.54140454146129,24.2660835835813,15.5550204958333,3.39266750704734,17.2086076990354,13.2972037811772,17.6619837875626,18.4955039897244,8.96186401882783,39.0637887715692,6.31806896084187,24.6216971387175,3.12289063110489,4.13823787980251,4.50155324513373,7.23383125611432,8.36848939561333,12.811372028485,10.4945931506896,32.337921342377,1.72454394346274,2.83659120251729,3.51902248327898,2.6303487891309,5.83899223373756,4.87553033131033,7.40815691068596,3.58261680273288,1.40442637462647,2.31613116403244,2.27330799516474,19.4698226183372,21.8109235782419,23.5881300513929,31.9605393040034,22.2343581874566,22.2144642557825,28.3691412595498,26.2907933371627,47.2899636587036,73.5582529113258,79.1287176861239,111.712819554189,121.053589588175,129.315017906429,141.453565373432,14.7202963994889,5.35103984372279,7.26921322564356,7.1401652999157,2.34617075588757,4.41249676534833,6.05677068213839,6.85723983719365,9.11749979763968,7.03834816616469,12.8122846617018,8.39964669092456,9.0480675168097,7.56034593756373,7.79856348476481,6.29173586057955,11.8875927431082,10.3553462092271,5.87970492954553,8.22589290790047,10.1436962105772,16.2921062276251,15.3222464862424,14.097299797954,18.6547784516559,34.2455543312677,31.399745568275,32.0832626196681,73.5202515176129,5.33904338291501,9.04171377520734,8.7696223830093,9.53442570525964,15.9176925436595,22.6617008085464,25.0295639582205,17.3484692649288,29.6526326243128,34.5043695665651,33.1205443424968,56.79085650685,57.3354052939944,48.6166990644382,43.419916922703,11.2699446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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77559 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000159742_5end | |||
|cluster_id=chr3:116510985..116511054,- | |||
|description=CAGE_peak_1_at_Agl_5end | |||
|id=chr3:116510985..116511054,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.82e-12!47;UBERON:0005256!3.83e-09!47;UBERON:0007100!2.89e-08!18;UBERON:0000948!2.89e-08!18;UBERON:0005498!2.89e-08!18;UBERON:0004140!2.89e-08!18;UBERON:0009881!2.89e-08!18;UBERON:0004141!2.89e-08!18;UBERON:0003084!2.89e-08!18;UBERON:0007005!2.89e-08!18;UBERON:0004139!2.89e-08!18;UBERON:0004291!2.89e-08!18;UBERON:0004111!3.45e-08!122;UBERON:0004535!8.14e-08!23;UBERON:0001009!8.14e-08!23;UBERON:0003103!1.53e-07!43;UBERON:0000025!8.48e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.82e-12,47;UBERON:0003104,2.41e-12,61;UBERON:0009142,2.41e-12,61;UBERON:0005256,1.43e-09,45;UBERON:0007100,2.89e-08,18;UBERON:0000948,2.89e-08,18;UBERON:0005498,2.89e-08,18;UBERON:0004140,2.89e-08,18;UBERON:0009881,2.89e-08,18;UBERON:0004141,2.89e-08,18;UBERON:0003084,2.89e-08,18;UBERON:0007005,2.89e-08,18;UBERON:0004139,2.89e-08,18;UBERON:0004291,2.89e-08,18;UBERON:0004111,3.58e-08,122;UBERON:0004535,8.13e-08,23;UBERON:0001009,8.13e-08,23;UBERON:0003103,1.52e-07,43;UBERON:0000025,8.78e-07,114 | |||
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| |||
|short_description=p1@Agl | |||
}} |
Latest revision as of 12:14, 1 October 2015
Short description: | p1@Agl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Agl_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 0bp_to_ENSMUST00000159742_5end |
EntrezGene: | Agl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.82e-12 | 47 |
mesenchyme | 2.41e-12 | 61 |
entire embryonic mesenchyme | 2.41e-12 | 61 |
trunk mesenchyme | 1.43e-09 | 45 |
primary circulatory organ | 2.89e-08 | 18 |
heart | 2.89e-08 | 18 |
primitive heart tube | 2.89e-08 | 18 |
primary heart field | 2.89e-08 | 18 |
anterior lateral plate mesoderm | 2.89e-08 | 18 |
heart tube | 2.89e-08 | 18 |
heart primordium | 2.89e-08 | 18 |
cardiac mesoderm | 2.89e-08 | 18 |
cardiogenic plate | 2.89e-08 | 18 |
heart rudiment | 2.89e-08 | 18 |
anatomical conduit | 3.58e-08 | 122 |
cardiovascular system | 8.13e-08 | 23 |
circulatory system | 8.13e-08 | 23 |
compound organ | 1.52e-07 | 43 |
tube | 8.78e-07 | 114 |