FFCP PHASE1:Hg19::chr7:94037178..94037204,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:94037178..94037204,- | |||
|coexpression_cluster_id=C3451 | |||
|description=CAGE_peak_at_chr7:94037178..94037204,- | |||
|id=chr7:94037178..94037204,- | |||
|ontology_enrichment_celltype=CL:0000055!4.31e-25!180;CL:0000057!8.40e-24!75;CL:0000048!1.76e-11!430;CL:0000723!8.23e-11!436;CL:0000034!2.78e-10!444;CL:0002334!1.58e-09!12;CL:0002320!2.76e-08!365;CL:0002620!5.04e-08!23;CL:0000183!6.54e-08!59;CL:0002494!3.18e-07!16;CL:0000134!4.38e-07!358;CL:0000187!4.85e-07!54;CL:0000680!6.73e-07!57;CL:0000056!6.73e-07!57;CL:0000355!6.73e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000499;4.73e-09;28!CL:0000135;3.58e-08;3!CL:0000388;3.58e-08;3!CL:0000327;5.70e-08;15!CL:0000153;1.78e-07;9!CL:0000447;1.78e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.71e-14,76;CL:0000499,4.31e-09,28;CL:0000135,2.14e-08,3;CL:0000388,2.14e-08,3;CL:0000327,5.77e-08,15;CL:0000153,2.05e-07,9;CL:0000447,2.05e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.76e-11!83;UBERON:0002329!8.76e-11!83;UBERON:0003077!8.76e-11!83;UBERON:0003059!8.76e-11!83;UBERON:0007282!8.76e-11!83;UBERON:0009618!8.76e-11!83;UBERON:0007285!8.76e-11!83;UBERON:0004290!4.23e-09!70;UBERON:0002384!4.41e-09!375;UBERON:0000486!9.36e-08!82;UBERON:0001134!2.09e-07!61;UBERON:0002036!2.09e-07!61;UBERON:0003082!2.09e-07!61;UBERON:0003102!2.96e-07!95;UBERON:0002385!6.62e-07!63;UBERON:0001015!6.62e-07!63;UBERON:0000383!6.62e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.58e-08;3!UBERON:0000043;3.58e-08;3!UBERON:0007845;3.58e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.14e-08,3;UBERON:0000043,2.14e-08,3;UBERON:0007845,2.14e-08,3 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.422863212287913,3.00219895059391,0.893922188854576,2.61701557230111,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,1.32558950291166,0,0,0,0,0,1.83600622119828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.0843174571537,0.50133791063589,5.06962816362883,0,2.91980922181582,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4666914686485,0.506522046658319,0.397227542439656,9.75244510545967,2.83734705758686,0.560677600142307,0,1.2333377420858,0,0.808264032418128,0.817309515567294,0.302714855289863,1.15235184896,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0.323745888736263,0,0,0.245668634623536,0.309977343527296,2.37600571456411,3.4617370098998,0,0.718618141816238,0,0.250237039743928,0,0.438977620880838,3.0648779579902,1.50238058906597,0.567160915800105,10.7633781413317,0.85422955527427,0.423863802319124,9.30282397861647,0.309157587715317,9.01741890159702,0.37223371266318,0,0.194874010322397,14.8935926804028,0.460249493211497,0,11.3603069605317,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,1.92972281457866,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.26593811658487,2.08014873822732,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0,0,0,0,0,3.44585807502342,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08506009479894,3.32753378449291,1.24900292158013,2.52323864054295,0.35142424497814,0.601892199455438,0,1.03473071292505,0.664225598535437,0.368738337083406,0.260650843404249,0.587403472388222,2.74514739048685,0,0,0,0,0,0.907170879989041,0.992431231275107,0.61384789315225,4.77122160536225,0.896974044789907,0.511707249066704,3.53878626515936,1.48418066444991,0.616838775210622,1.9531789784444,0,1.03850885836724,0.929683027679674,0,0,0,0.34444334449382,0.910455840033585,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0.551346289938122,0.107420244868274,0.435050081742686,0.170453254832202,0.534192213880424,0,0,0,0,0,12.277681526395,0,0,0,0,0,0.143124886741991,0.372158369359667,0,1.33441135746677,0.511795582622668,0,0,1.56989728039846,0.179872457583315,1.37268514868027,0.824686816419805,0,1.58510321173008,3.79132610615083,0,1.21856744815642,0,0.136499911407986,0.848432591722276,4.52032466480971,0,0.66343897524122,1.31535265576129,0,0.655894752046633,0,0,1.69017361519345,0,0.0982490410131212,0,0,3.58882980006029,7.24448764511784,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0.242780379534093,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,4.68389848605125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.5085370753095,0.542999601753713,0.864221491201268,1.30634944043764,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,0.934853239388898,0.554805861502613,0.947015026375446,0.251567901752575,0,1.14420034198462,2.11723293268535,1.08806040407946,0.443565449968902,0.318593534327405,0,0.310525913752519,0.414706207840855,0.797525143673985,0,1.80309130796662,0.380805212168795,0,0.909243296012797,0.214821114084977,0.464033759878494,0.398095888698616,0,1.37358282073117,0.673498977531838,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,3.87943538059752,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,1.31135736302374,0,0,0,0,0,0.4226557275834,1.18948980281472,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,1.8599750908337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| |||
|short_description=p@chr7:94037178..94037204,- | |||
}} |
Latest revision as of 12:41, 31 July 2015
Short description: | p@chr7:94037178..94037204, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94037178..94037204, - |
Coexpression cluster: | C3451_Smooth_Fibroblast_Ewing_umbilical_normal_Adipocyte_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.71e-14 | 76 |
stromal cell | 4.31e-09 | 28 |
fibrocyte | 2.14e-08 | 3 |
tendon cell | 2.14e-08 | 3 |
extracellular matrix secreting cell | 5.77e-08 | 15 |
GAG secreting cell | 2.05e-07 | 9 |
carbohydrate secreting cell | 2.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.14e-08 | 3 |
tendon | 2.14e-08 | 3 |
regular connective tissue | 2.14e-08 | 3 |